RNA–Protein interactions for RNA: ENST00000399299.5

SMIM11A-203, Transcript of small integral membrane protein 11A, humanhuman

TSL 1 (best) BASIC

Gene SMIM11A, Length 1,033 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMIM11A-203ENST00000399299 H3F3AP84243 136 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 ITGADQ13349 1161 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 MSRB3Q8IXL7 192 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 BBS10Q8TAM1 723 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 SLC35B4Q969S0 331 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 HS3ST6Q96QI5 342 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF300Q96RE9 604 aaPredicted RBP13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 PIP5K1AQ99755 562 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 SIKE1Q9BRV8 207 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 TMUB1Q9BVT8 246 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 SPATA9Q9BWV2 254 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 RABEP2Q9H5N1 569 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 RLIMQ9NVW2 624 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF232Q9UNY5 417 aa13.19□□□□□ -0.3
SMIM11A-203ENST00000399299 C2CD3Q4AC94 2353 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 TRBV5-3A0A0A0MS03 114 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 TMEM72A0PK05 275 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF814B7Z6K7 855 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 GPR171O14626 319 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 NUDT7P0C024 238 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 ETS2P15036 469 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 COX5AP20674 150 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 IL32P24001 234 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 SLC35A1P78382 337 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 ACKR1Q16570 336 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 AGKQ53H12 422 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 RPS26P11Q5JNZ5 115 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 WBP2NLQ6ICG8 309 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 C20orf204Q6ZNR8 217 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 KISS1RQ969F8 398 aaPredicted RBP13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 PIGTQ969N2 578 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 S100PBPQ96BU1 408 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 CHST2Q9Y4C5 530 aa13.18□□□□□ -0.3
SMIM11A-203ENST00000399299 DSCAMO60469 2012 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 A0A1W2PP18 115 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 EDF1O60869 148 aaKnown RBP13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 SASH3O75995 380 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 PGM3O95394 542 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 ADAP00813 363 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 GKN3PP0CG01 181 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 ARAFP10398 606 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 IMPDH2P12268 514 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 CCNA2P20248 432 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 CXCR1P25024 350 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 OR2B6P58173 313 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 COPZ1P61923 177 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 PAGE3Q5JUK9 113 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 PAQR6Q6TCH4 344 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 SSX8Q7RTT4 187 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 WFDC8Q8IUA0 241 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF100Q8IYN0 542 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 CLIP4Q8N3C7 705 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 HSD17B8Q92506 261 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 TMEM204Q9BSN7 226 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 POTEKPQ9BYX7 375 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 UBTD1Q9HAC8 227 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 NGBQ9NPG2 151 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 VAPAQ9P0L0 249 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 SLAMF8Q9P0V8 285 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 PRSS50Q9UI38 385 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 CORO2BQ9UQ03 480 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF469Q96JG9 3925 aaPredicted RBP13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 VPS13CQ709C8 3753 aa13.17□□□□□ -0.3
SMIM11A-203ENST00000399299 ARID1AO14497 2285 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 ZC3H12DA2A288 527 aaKnown RBP13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 C5orf58C9J3I9 102 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 CD99P14209 185 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 EDNRAP25101 427 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 HOXC12P31275 282 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 ADAM8P78325 824 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 TAB1Q15750 504 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF311Q5JNZ3 666 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 GCNT6Q5T4J0 391 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 BHLHA15Q7RTS1 189 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 LRRC75A-AS1Q8N1F1 130 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 MAL2Q969L2 176 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF775Q96BV0 537 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 PLPPR2Q96GM1 343 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 NAA11Q9BSU3 229 aaPredicted RBP13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF385DQ9H6B1 395 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 TMEM38AQ9H6F2 299 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 TRIM33Q9UPN9 1127 aa13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 NOSIPQ9Y314 301 aaKnown RBP13.16□□□□□ -0.3
SMIM11A-203ENST00000399299 NIPBLQ6KC79 2804 aaeCLIP13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 RAMP1O60894 148 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 GPIP06744 558 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 PRG2P13727 222 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 GPX2P18283 190 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 NCF2P19878 526 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 PRKAR1BP31321 381 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 IDUAP35475 653 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 TSC22D1Q15714 1073 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 FBXW9Q5XUX1 488 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 REEP3Q6NUK4 255 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 SEZ6L2Q6UXD5 910 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 DLEU7Q6UYE1 221 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 ZNF704Q6ZNC4 412 aaPredicted RBP13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 SERPINA11Q86U17 422 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 P2RY8Q86VZ1 359 aa13.15□□□□□ -0.3
SMIM11A-203ENST00000399299 KRT73Q86Y46 540 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms