RNA–Protein interactions for RNA: ENST00000398969.7

COL13A1-203, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,267 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-203ENST00000398969 SLC43A2Q8N370 569 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF655Q8N720 491 aaPredicted RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 RSC1A1Q92681 617 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 OR2M2Q96R28 347 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 EVA1AQ9H8M9 152 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 BRD7Q9NPI1 651 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 DNAJB12Q9NXW2 375 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 CHRNA9Q9UGM1 479 aa23.53■■□□□ 1.36
COL13A1-203ENST00000398969 MRPS7Q9Y2R9 242 aaKnown RBP23.53■■□□□ 1.36
COL13A1-203ENST00000398969 RASGRP1O95267 797 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 COL9A1P20849 921 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 LSSP48449 732 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 GAS6Q14393 721 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ALG10BQ5I7T1 473 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 CD276Q5ZPR3 534 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 DGAT2L6Q6ZPD8 337 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 SYS1Q8N2H4 156 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 FAM98AQ8NCA5 519 aaKnown RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 OR52R1Q8NGF1 315 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 OR4K13Q8NH42 304 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ARL6IP5O75915 188 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 KLF8O95600 359 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 IFI6P09912 130 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 HOXB2P14652 356 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 HIST1H1CP16403 213 aaKnown RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 OR3A3P47888 321 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 RPS11P62280 158 aaKnown RBP eCLIP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ACTA2P62736 377 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ACTG2P63267 376 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ESPNLQ6ZVH7 1005 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 GRAMD2AQ8IUY3 354 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 TIGD4Q8IY51 512 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ZNF431Q8TF32 576 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 HOXB13Q92826 284 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ANKRD9Q96BM1 317 aaPredicted RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 GPR137Q96N19 417 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 CNN2Q99439 309 aaKnown RBP23.52■■□□□ 1.36
COL13A1-203ENST00000398969 CACNG6Q9BXT2 260 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 TRIM2Q9C040 744 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 COPZ2Q9P299 210 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 TEKT2Q9UIF3 430 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 ICAM5Q9UMF0 924 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 MTCH2Q9Y6C9 303 aa23.52■■□□□ 1.36
COL13A1-203ENST00000398969 LRRN3E7EW58 273 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 GALR3O60755 368 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-203ENST00000398969 TSC22D2O75157 780 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 UCHL1P09936 223 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 OR2T7P0C7T2 308 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 GBX2P52951 348 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-203ENST00000398969 OR51L1Q8NGJ5 315 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 OR2T27Q8NH04 317 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 ASB12Q8WXK4 309 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 TTC9Q92623 222 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 LRRN3Q9H3W5 708 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 RANBP3Q9H6Z4 567 aaPredicted RBP23.51■■□□□ 1.35
COL13A1-203ENST00000398969 FBRSQ9HAH7 460 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 MGAT4AQ9UM21 535 aa23.51■■□□□ 1.35
COL13A1-203ENST00000398969 ANXA3P12429 323 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 NAA10P41227 235 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-203ENST00000398969 CCR6P51684 374 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 SIRPAP78324 504 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 POMGNT2Q8NAT1 580 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 OR51Q1Q8NH59 317 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 ADAMTS14Q8WXS8 1223 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 GSDMCQ9BYG8 508 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 CAMK2AQ9UQM7 478 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 CXCL3P19876 107 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 PSG6Q00889 435 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 GGTLC2Q14390 218 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 CDONQ4KMG0 1287 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 LINC00114Q6XXX2 140 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 FAM109AQ8N4B1 249 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 LSMEM1Q8N8F7 131 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 BAHD1Q8TBE0 780 aaPredicted RBP23.5■■□□□ 1.35
COL13A1-203ENST00000398969 BMFQ96LC9 184 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 LRFN5Q96NI6 719 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 OR14A2Q96R54 314 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 MFRPQ9BY79 579 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 CCDC86Q9H6F5 360 aaKnown RBP23.5■■□□□ 1.35
COL13A1-203ENST00000398969 PIAS3Q9Y6X2 628 aa23.5■■□□□ 1.35
COL13A1-203ENST00000398969 ZBTB37Q5TC79 503 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 SLC35F2Q8IXU6 374 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 OR8H1Q8NGG4 311 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 SPATA2Q9UM82 520 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 AK6Q9Y3D8 172 aaKnown RBP23.49■■□□□ 1.35
COL13A1-203ENST00000398969 NDUFB2O95178 105 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 IGKV1D-16P01601 117 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 ANKRD34CP0C6C1 535 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 COL19A1Q14993 1142 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 BAIAP2L2Q6UXY1 529 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 OVCH1Q7RTY7 1134 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 OR4N2Q8NGD1 307 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 ANGPTL6Q8NI99 470 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 C7orf50Q9BRJ6 194 aaKnown RBP23.49■■□□□ 1.35
COL13A1-203ENST00000398969 ORAI3Q9BRQ5 295 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 ENTPD2Q9Y5L3 495 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 IER3IP1Q9Y5U9 82 aa23.49■■□□□ 1.35
COL13A1-203ENST00000398969 MCIDASD6RGH6 385 aa23.48■■□□□ 1.35
COL13A1-203ENST00000398969 GSTZ1O43708 216 aaPredicted RBP23.48■■□□□ 1.35
COL13A1-203ENST00000398969 NOS1APO75052 506 aaPredicted RBP23.48■■□□□ 1.35
Retrieved 100 of 20,778 RNA–protein pairs in 40.4 ms