RNA–Protein interactions for RNA: ENST00000398020.6

TMEM55B-202, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TMEM55B, Length 1,696 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM55B-202ENST00000398020 FMO6PO60774 539 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 AQP8O94778 261 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 DIO1P49895 249 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 CDH12P55289 794 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ELOA3BQ3SY89 546 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ULK3Q6PHR2 472 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 FAM86B1Q8N7N1 296 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ELOA3Q8NG57 546 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ADAMTS16Q8TE57 1224 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 DNAJA4Q8WW22 397 aaPredicted RBP22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ITLN2Q8WWU7 325 aaPredicted RBP22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 ROBO4Q8WZ75 1007 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 SDCCAG3Q96C92 435 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 BTBD10Q9BSF8 475 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 DCAF13Q9NV06 445 aaKnown RBP22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 RPS6KA6Q9UK32 745 aa22.74■■□□□ 1.23
TMEM55B-202ENST00000398020 WIPF3A6NGB9 483 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 IL2RAP01589 272 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 TIMP3P35625 211 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 SMSP52788 366 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 CDSNQ15517 529 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 P3H2Q8IVL5 708 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 CCDC124Q96CT7 223 aaKnown RBP22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 PRRG4Q9BZD6 226 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 PAQR5Q9NXK6 330 aaPredicted RBP22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 SELENONQ9NZV5 590 aa22.73■■□□□ 1.23
TMEM55B-202ENST00000398020 MPDZO75970 2070 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 IGHV3-15A0A0B4J1V0 119 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 SULT2B1O00204 365 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 SYNGR4O95473 234 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 THY1P04216 161 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 KLK2P20151 261 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 CEACAM8P31997 349 aaPredicted RBP22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 AGFG1P52594 562 aaKnown RBP22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 ZNF239Q16600 458 aaKnown RBP22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 DNAL1Q4LDG9 190 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 RIPPLY2Q5TAB7 128 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 CYP2R1Q6VVX0 501 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 TMPPEQ6ZT21 453 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 MED12LQ86YW9 2145 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 INTS12Q96CB8 462 aaKnown RBP22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 NSMCE2Q96MF7 247 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 TM9SF2Q99805 663 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 TIGARQ9NQ88 270 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 COQ3Q9NZJ6 369 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 MCTS1Q9ULC4 181 aaKnown RBP22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 ZNF175Q9Y473 711 aa22.72■■□□□ 1.23
TMEM55B-202ENST00000398020 A8MVM7 634 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 FKBP2P26885 142 aaKnown RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 YAP1P46937 504 aaKnown RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 FOXF2Q12947 444 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 FOXD4Q12950 439 aaPredicted RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 IFI44LQ53G44 452 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 ZNF613Q6PF04 617 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 SLC38A4Q969I6 547 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 CPNE4Q96A23 557 aaPredicted RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 SLC47A1Q96FL8 570 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 AMBRA1Q9C0C7 1298 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 SLC7A7Q9UM01 511 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 SAMD4AQ9UPU9 718 aaKnown RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 HDGFL3Q9Y3E1 203 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 PRKD3O94806 890 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 IMPDH2P12268 514 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 ATP6V1B2P21281 511 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 ENPP1P22413 925 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 CLK1P49759 484 aaKnown RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 MAP2K6P52564 334 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 RAC3P60763 192 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 MS4A2Q01362 244 aa22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 PIN1Q13526 163 aaPredicted RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 GEMIN6Q8WXD5 167 aaKnown RBP22.71■■□□□ 1.23
TMEM55B-202ENST00000398020 IFNW1P05000 195 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 PNMTP11086 282 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 TAS2R41P59536 307 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 EGR4Q05215 589 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 TRIM25Q14258 630 aaKnown RBP22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 LIX1LQ8IVB5 337 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 RNF122Q9H9V4 155 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 C12orf10Q9HB07 376 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 ACTR3BQ9P1U1 418 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 CLEC4AQ9UMR7 237 aa22.7■■□□□ 1.22
TMEM55B-202ENST00000398020 SPTBN1Q01082 2364 aaKnown RBP22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 TRAPPC13A5PLN9 417 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 RCBTB2O95199 551 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 TMIGD3P0DMS9 266 aaPredicted RBP22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 OR2B6P58173 313 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 CSNK2A1P68400 391 aaPredicted RBP22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 C1orf140Q5VVS0 124 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 WDR88Q6ZMY6 472 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 ZNF808Q8N4W9 903 aaPredicted RBP22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 KTI12Q96EK9 354 aaPredicted RBP22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 SLC41A3Q96GZ6 507 aa22.69■■□□□ 1.22
TMEM55B-202ENST00000398020 IGKV1D-42A0A075B6H8 117 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 A0A087WUJ7 227 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 HSPB2A8KAH6 182 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 J3KTA2 159 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 CHP2O43745 196 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 NPIPB7O75200 414 aa22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 DNAJC8O75937 253 aaPredicted RBP22.68■■□□□ 1.22
TMEM55B-202ENST00000398020 LYPD3O95274 346 aa22.68■■□□□ 1.22
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms