RNA–Protein interactions for RNA: ENST00000397109.7

SEC13-208, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 1 (best) BASIC

Gene SEC13, Length 1,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-208ENST00000397109 FAM71CQ8NEG0 241 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 PNPT1Q8TCS8 783 aaKnown RBP13.05□□□□□ -0.32
SEC13-208ENST00000397109 SPATA9Q9BWV2 254 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 TMEM185BQ9H7F4 350 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 EXOSC3Q9NQT5 275 aaKnown RBP13.05□□□□□ -0.32
SEC13-208ENST00000397109 SERINC1Q9NRX5 453 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 CRIM1Q9NZV1 1036 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 P2RX2Q9UBL9 471 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 NIPSNAP3AQ9UFN0 247 aaPredicted RBP13.05□□□□□ -0.32
SEC13-208ENST00000397109 RIMS3Q9UJD0 308 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 EMC9Q9Y3B6 208 aa13.05□□□□□ -0.32
SEC13-208ENST00000397109 TMEM247A6NEH6 219 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 EVPLLA8MZ36 301 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 ARPC2O15144 300 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 EFNA2O43921 213 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 AQP8O94778 261 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 PLGP00747 810 aaPredicted RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 CHRM4P08173 479 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 CD8BP10966 210 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 CRATP43155 626 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 SLC6A8P48029 635 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 HSPA13P48723 471 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 SIRPAP78324 504 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 TMEM176BQ3YBM2 270 aaPredicted RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 VWA1Q6PCB0 445 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 FAM214BQ7L5A3 538 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 BTLAQ7Z6A9 289 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 ZZZ3Q8IYH5 903 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 CPNE4Q96A23 557 aaPredicted RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 ZG16BQ96DA0 208 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 REXO5Q96IC2 774 aaKnown RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 GMPPAQ96IJ6 420 aaPredicted RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 ZNF583Q96ND8 569 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 KAT8Q9H7Z6 458 aaKnown RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 ACER3Q9NUN7 267 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 GALNT8Q9NY28 637 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 POLQO75417 2590 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 TACC2O95359 2948 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 ABCA4P78363 2273 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 DHRS12A0PJE2 317 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 AGAP5A6NIR3 686 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 ENO4A6NNW6 628 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 GOSR1O95249 250 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 DBIP07108 87 aaKnown RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 EPXP11678 715 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 IL11P20809 199 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 CTBP2P56545 445 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 DSTNP60981 165 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 SNTB1Q13884 538 aaKnown RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 DAZAP2Q15038 168 aaPredicted RBP13.04□□□□□ -0.32
SEC13-208ENST00000397109 GUSBP1Q15486 140 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 TRIP10Q15642 601 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 GLYATQ6IB77 296 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 C3orf33Q6P1S2 294 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 SERPINA11Q86U17 422 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 TMEM200AQ86VY9 491 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 PEX5LQ8IYB4 626 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 OR2T12Q8NG77 320 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 NSMCE2Q96MF7 247 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 YY1AP1Q9H869 796 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 NDRG3Q9UGV2 375 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 PROCRQ9UNN8 238 aa13.04□□□□□ -0.32
SEC13-208ENST00000397109 ELOVL7A1L3X0 281 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 FAM220BPB1ANY3 271 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 SS18L1O75177 396 aaPredicted RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 CTAG2O75638 210 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ETFAP13804 333 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 IL7RP16871 459 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 GGT1P19440 569 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 RPS4Y1P22090 263 aaKnown RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 FKBP2P26885 142 aaKnown RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 CRISP3P54108 245 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 MTPNP58546 118 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 KRTAP10-9P60411 292 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 MERTKQ12866 999 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 SELPLGQ14242 412 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ZSWIM7Q19AV6 140 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ERICH5Q6P6B1 374 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 CALHM3Q86XJ0 350 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 C10orf111Q8N326 155 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ICA1LQ8NDH6 482 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ATP6V1C2Q8NEY4 427 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 OR6K3Q8NGY3 331 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ZNF563Q8TA94 476 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 SLC25A43Q8WUT9 341 aaPredicted RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 DACH2Q96NX9 599 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 NR1H4Q96RI1 486 aaPredicted RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 TMEM38AQ9H6F2 299 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 CACYBPQ9HB71 228 aaKnown RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 BATF3Q9NR55 127 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 ELOVL5Q9NYP7 299 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 SPIN1Q9Y657 262 aaPredicted RBP13.03□□□□□ -0.32
SEC13-208ENST00000397109 CCDC168Q8NDH2 2452 aa13.03□□□□□ -0.32
SEC13-208ENST00000397109 TCRBV5S2A0A599 114 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 FAM221AA4D161 298 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 A6NNC1 897 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 CGAP01215 116 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 NID1P14543 1247 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 ATP6V1B2P21281 511 aa13.02□□□□□ -0.33
SEC13-208ENST00000397109 FASP25445 335 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms