RNA–Protein interactions for RNA: ENST00000397053.6

UPF2-203, Transcript of UPF2, regulator of nonsense mediated mRNA decay, humanhuman

APPRIS P1 TSL 5 BASIC

Gene UPF2, Length 5,369 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF2-203ENST00000397053 M0QZQ0 153 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 HPRP00739 348 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 UGT2B7P16662 529 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 EIF1P41567 113 aaKnown RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 BMXP51813 675 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 PPP5CP53041 499 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 PIGFQ07326 219 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 OR4D1Q15615 310 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 RPE65Q16518 533 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 BATFQ16520 125 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 HBMQ6B0K9 141 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 MRPL10Q7Z7H8 261 aaKnown RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 WFDC8Q8IUA0 241 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 MISPQ8IVT2 679 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 CMIPQ8IY22 773 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 TDHQ8IZJ6 230 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 ZFP82Q8N141 532 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 TMEM185AQ8NFB2 350 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 OR6T1Q8NGN1 323 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 OR2T35Q8NGX2 323 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 DCLRE1CQ96SD1 692 aaKnown RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 GMLQ99445 158 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 NKX3-1Q99801 234 aaPredicted RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 SLC25A18Q9H1K4 315 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 LANCL2Q9NS86 450 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 EHFQ9NZC4 300 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 RTTNQ86VV8 2226 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 TXNL1O43396 289 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 KCNK2O95069 426 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 APOA2P02652 100 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 F13BP05160 661 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 PRSS56P0CW18 603 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 FCGR2AP12318 317 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 MAOAP21397 527 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 ERVPABLB-1P60509 514 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 P2RY14Q15391 338 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 C18orf21Q32NC0 220 aaPredicted RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 SLC6A19Q695T7 634 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 ZNF679Q8IYX0 411 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 ACOT11Q8WXI4 607 aaPredicted RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 NMNAT1Q9HAN9 279 aaPredicted RBP6.72□□□□□ -1.33
UPF2-203ENST00000397053 TMEM9BQ9NQ34 198 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 GPR83Q9NYM4 423 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 ENPP5Q9UJA9 477 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 PRELID1Q9Y255 219 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 SPO11Q9Y5K1 396 aa6.72□□□□□ -1.33
UPF2-203ENST00000397053 GFRA2O00451 464 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 SULT1B1O43704 296 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 GMDSO60547 372 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 GYPBP06028 91 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 GRPP07492 148 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 CSF1P09603 554 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 FGF3P11487 239 aaPredicted RBP6.71□□□□□ -1.33
UPF2-203ENST00000397053 HOXA11P31270 313 aaPredicted RBP6.71□□□□□ -1.33
UPF2-203ENST00000397053 RAB11AP62491 216 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 IL13RA1P78552 427 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 MC2RQ01718 297 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 RIPPLY1Q0D2K3 151 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 MEF2DQ14814 521 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 ADPRMQ3LIE5 342 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 C6orf15Q6UXA7 325 aaPredicted RBP6.71□□□□□ -1.33
UPF2-203ENST00000397053 NLRC3Q7RTR2 1065 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 CLEC14AQ86T13 490 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 IGDCC3Q8IVU1 814 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 GLB1L2Q8IW92 636 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 OR7G1Q8NGA0 311 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 OR1N1Q8NGS0 311 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 ADAMTS19Q8TE59 1207 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 ARL11Q969Q4 196 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 SLAMF9Q96A28 289 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 SLC41A2Q96JW4 573 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 ATF6BQ99941 703 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 PHF7Q9BWX1 381 aaPredicted RBP6.71□□□□□ -1.33
UPF2-203ENST00000397053 KIAA1456Q9P272 454 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 DNAJC15Q9Y5T4 150 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 FAM186AA6NE01 2351 aa6.71□□□□□ -1.33
UPF2-203ENST00000397053 GOSR2O14653 212 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 ABCD4O14678 606 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 DNAJB5O75953 348 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 IGFBP1P08833 259 aaPredicted RBP6.71□□□□□ -1.34
UPF2-203ENST00000397053 HOXB5P09067 269 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 GGT1P19440 569 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 CPT2P23786 658 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 PAX6P26367 422 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 CD27P26842 260 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 JAG1P78504 1218 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 SLC7A9P82251 487 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 TBC1D28Q2M2D7 210 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 HYAL4Q2M3T9 481 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 C14orf28Q4W4Y0 310 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 CTSL3PQ5NE16 218 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 C5orf46Q6UWT4 87 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 ZNF454Q8N9F8 522 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 DEFB108BQ8NET1 73 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 VN1R2Q8NFZ6 395 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 OR13C9Q8NGT0 318 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 SECTM1Q8WVN6 248 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 NT5C3BQ969T7 300 aa6.71□□□□□ -1.34
UPF2-203ENST00000397053 CIDECQ96AQ7 238 aaPredicted RBP6.71□□□□□ -1.34
UPF2-203ENST00000397053 ZNF75AQ96N20 296 aa6.71□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 25.4 ms