RNA–Protein interactions for RNA: ENST00000396629.6

SCFD1-202, Transcript of sec1 family domain containing 1, humanhuman

TSL 2 BASIC

Gene SCFD1, Length 2,021 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCFD1-202ENST00000396629 THSD4Q6ZMP0 1018 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 C1orf229Q6ZS94 237 aaPredicted RBP7.3□□□□□ -1.24
SCFD1-202ENST00000396629 TEX29Q8N6K0 151 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CLDND2Q8NHS1 167 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ADAMTS15Q8TE58 950 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 DCAKDQ8WVC6 231 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM45BQ96B21 275 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 MTERF3Q96E29 417 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 LRRC37BQ96QE4 947 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 SDF2Q99470 211 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CCT7Q99832 543 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 NMUR2Q9GZQ4 415 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CTPS2Q9NRF8 586 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 CHRNA9Q9UGM1 479 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 KCNE5Q9UJ90 142 aa7.3□□□□□ -1.24
SCFD1-202ENST00000396629 ARPC4-TTLL3A0A0A6YYG9 625 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 H3BQF6 201 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 ANKRD28O15084 1053 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 IGLV1-44P01699 117 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 TFP02787 698 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 KRT16P08779 473 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 CECR9P0C854 216 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 SDC1P18827 310 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 NPR2P20594 1047 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 EFNA1P20827 205 aaPredicted RBP7.29□□□□□ -1.24
SCFD1-202ENST00000396629 THBS4P35443 961 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 OR2B6P58173 313 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 GNG11P61952 73 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 C2orf54Q08AI8 447 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 TBRG1Q3YBR2 411 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 SHQ1Q6PI26 577 aaKnown RBP7.29□□□□□ -1.24
SCFD1-202ENST00000396629 LCA5Q86VQ0 697 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 ADGRG3Q86Y34 549 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 RELL1Q8IUW5 271 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 FAM169BQ8N8A8 192 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 ZDHHC22Q8N966 263 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 POMGNT2Q8NAT1 580 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 OR1K1Q8NGR3 316 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 PSMA8Q8TAA3 256 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 TSSK3Q96PN8 268 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 SUCNR1Q9BXA5 334 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 ESM1Q9NQ30 184 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 ZDHHC18Q9NUE0 388 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 GPATCH2Q9NW75 528 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 C1orf109Q9NX04 203 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM181Q9P2C4 612 aa7.29□□□□□ -1.24
SCFD1-202ENST00000396629 TRAV20A0A0B4J274 112 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 VSTM5A8MXK1 200 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 EIF1BO60739 113 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CYP7B1O75881 506 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 AVPP01185 164 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 SNRPAP09012 282 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 HKR1P10072 659 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 HOXB1P14653 301 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CCT3P49368 545 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 PRSS12P56730 875 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 POU3F1Q03052 451 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 FOXL1Q12952 345 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 TIFABQ6ZNK6 161 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 SPATA21Q7Z572 469 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 ZIC4Q8N9L1 334 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 FAM71CQ8NEG0 241 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 OR56A1Q8NGH5 318 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 OR51F2Q8NH61 342 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 MAGEE2Q8TD90 523 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 BCL2L2Q92843 193 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 MRPL24Q96A35 216 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 DNAJA3Q96EY1 480 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 OR7D2Q96RA2 312 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 NAA11Q9BSU3 229 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 OR11A1Q9GZK7 315 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 TNFRSF12AQ9NP84 129 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 TMEM45AQ9NWC5 275 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 ATP6V1HQ9UI12 483 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 FAF1Q9UNN5 650 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 PRKDCP78527 4128 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CENPVL1A0A0U1RR11 272 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 SLC28A1O00337 649 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 PNPP00491 289 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CSTAP01040 98 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 GAAP10253 952 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 IMPDH2P12268 514 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CDH2P19022 906 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 PGM1P36871 562 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 GPR6P46095 362 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 UBA52P62987 128 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 SLC35A1P78382 337 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 IL1RL1Q01638 556 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 MIDNQ504T8 468 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 ELFN2Q5R3F8 820 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 AP1ARQ63HQ0 302 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 GRINAQ7Z429 371 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 R3HCC1LQ7Z5L2 792 aaKnown RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 C1QL2Q7Z5L3 287 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 ABHD12BQ7Z5M8 362 aaPredicted RBP7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CDK20Q8IZL9 346 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CLHC1Q8NHS4 586 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 SFXN5Q8TD22 340 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 CKAP2Q8WWK9 683 aa7.28□□□□□ -1.24
SCFD1-202ENST00000396629 OR5P2Q8WZ92 322 aa7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms