RNA–Protein interactions for RNA: ENST00000395898.3

VPS13C-204, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 11,012 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-204ENST00000395898 TDRD6O60522 2096 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 FAM171A2A8MVW0 826 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SSX4O60224 188 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 EIF1BO60739 113 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ALPLP05186 524 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 DEFB103AP81534 67 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RBMS2Q15434 407 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 PGGHGQ32M88 737 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RPL22L1Q6P5R6 122 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ADAMTSL4Q6UY14 1074 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 UBXN10Q96LJ8 280 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLC6A18Q96N87 628 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLC46A1Q96NT5 459 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NXF5Q9H1B4 397 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SYNPO2LQ9H987 977 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 STARD5Q9NSY2 213 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 FOCADQ5VW36 1801 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SIPA1L3O60292 1781 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 CLDN24A6NM45 220 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 H7C1Q1 480 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 CAPNS1P04632 268 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 PRKAR1BP31321 381 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ETV5P41161 510 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 IDH3GP51553 393 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 F2RL1P55085 397 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 DLX5P56178 289 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NKX6-1P78426 367 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KCNJ10P78508 379 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 GPLD1P80108 840 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 LTBQ06643 244 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ESCO2Q56NI9 601 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLX4IPQ5VYV7 408 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NLRP8Q86W28 1048 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SIMC1Q8NDZ2 872 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLC39A13Q96H72 371 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 C1GALT1Q9NS00 363 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 IL37Q9NZH6 218 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MYOTQ9UBF9 498 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KCND3Q9UK17 655 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 TIMM8BQ9Y5J9 83 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 BCAT2O15382 392 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 FZD7O75084 574 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SLC43A1O75387 559 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SPDEFO95238 335 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 C1SP09871 688 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 UBCP0CG48 685 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF44P15621 663 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 LTB4RQ15722 352 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 TAZQ16635 292 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ELP2Q6IA86 826 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MBOAT2Q6ZWT7 520 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZFPM2Q8WW38 1151 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZBTB8AQ96BR9 441 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 S100PBPQ96BU1 408 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RSPRY1Q96DX4 576 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MICU1Q9BPX6 476 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 WDR83Q9BRX9 315 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SEMA4GQ9NTN9 838 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 PPP1R14DQ9NXH3 145 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 B3GAT1Q9P2W7 334 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NME7Q9Y5B8 376 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 METTL15A6NJ78 407 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ARGFXA6NJG6 315 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 H3BQ06 376 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF780AO75290 641 aaPredicted RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZNF136P52737 540 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RAB6CQ53S08 254 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 NXNL2Q5VZ03 156 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 MEX3BQ6ZN04 569 aaKnown RBP5.09□□□□□ -1.59
VPS13C-204ENST00000395898 GAREM2Q75VX8 874 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 METTL4Q8N3J2 472 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 OR6T1Q8NGN1 323 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 STK35Q8TDR2 534 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 KHSRPQ92945 711 aaKnown RBP eCLIP5.09□□□□□ -1.591e-8■■□□□ 14.1
VPS13C-204ENST00000395898 ITFG2Q969R8 447 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 OR6C1Q96RD1 312 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 PBX4Q9BYU1 374 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 RAB6CQ9H0N0 254 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 WDR76Q9H967 626 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 SPHK1Q9NYA1 384 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 STEAP1Q9UHE8 339 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 CAMK2AQ9UQM7 478 aa5.09□□□□□ -1.59
VPS13C-204ENST00000395898 ZBTB42B2RXF5 422 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 MITFO75030 526 aaPredicted RBP5.09□□□□□ -1.6
VPS13C-204ENST00000395898 HLA-AP01891 365 aaKnown RBP5.09□□□□□ -1.6
VPS13C-204ENST00000395898 ABOP16442 354 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 CR2P20023 1033 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 CXADRP78310 365 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 CTBSQ01459 385 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF92Q03936 586 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 NKPD1Q17RQ9 610 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 KCTD11Q693B1 232 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 IGFN1Q86VF2 1251 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 ARFGAP1Q8N6T3 406 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 SLC38A5Q8WUX1 472 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 PHYHIPQ92561 330 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 TXN2Q99757 166 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 ZNF436Q9C0F3 470 aaPredicted RBP5.09□□□□□ -1.6
VPS13C-204ENST00000395898 ATAD5Q96QE3 1844 aa5.09□□□□□ -1.6
VPS13C-204ENST00000395898 TRAV27A0A087WT01 109 aa5.09□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms