RNA–Protein interactions for RNA: ENST00000395896.8

VPS13C-203, Transcript of vacuolar protein sorting 13 homolog C, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene VPS13C, Length 14,579 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13C-203ENST00000395896 COMMD9Q9P000 198 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ENPP5Q9UJA9 477 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PCDHGA1Q9Y5H4 931 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 STMND1H3BQB6 276 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 H3BSA7 217 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 M0R3H8 397 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PRKACGP22612 351 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CBX5P45973 191 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CDH15P55291 814 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PTOV1Q86YD1 416 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC35F3Q8IY50 421 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ANKRD53Q8N9V6 530 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SYT14Q8NB59 555 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MAFAQ8NHW3 353 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ERLEC1Q96DZ1 483 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 OR6C1Q96RD1 312 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PIGQQ9BRB3 760 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SAP130Q9H0E3 1048 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC25A19Q9HC21 320 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM9BQ9NQ34 198 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SERGEFQ9UGK8 458 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GRIP1Q9Y3R0 1128 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ANKRD17O75179 2603 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 KIAA1549LQ6ZVL6 1849 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TEX13CA0A0J9YWL9 993 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GTQ1 180 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 C7orf72A4D263 438 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NAP1L6A6NFF2 107 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ZAR1LA6NP61 321 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ALG1L2C9J202 215 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SEC14L2O76054 403 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GABARAPO95166 117 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NGFRP08138 427 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CD46P15529 392 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NR4A2P43354 598 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SSR4P51571 173 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 IST1P53990 364 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GPR85P60893 370 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 EMX1Q04741 257 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF91Q05481 1191 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PLK5Q496M5 336 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MRM1Q6IN84 353 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PODNL1Q6PEZ8 512 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMPPEQ6ZT21 453 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ELP5Q8TE02 316 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GAREM1Q9H706 876 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 HAO2Q9NYQ3 351 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 RNF215Q9Y6U7 377 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LOC102725191A0A1B0GVB3 256 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 KLRC4-KLRK1H3BQV0 150 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ADAM23O75077 832 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SYNGR4O95473 234 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 EGR3Q06889 387 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FZD2Q14332 565 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GPAT4Q86UL3 456 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 Q8N9G6 341 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 KCNS3Q9BQ31 491 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 C1orf198Q9H425 327 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CTPS2Q9NRF8 586 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MCUBQ9NWR8 336 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC39A1Q9NY26 324 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DIMT1Q9UNQ2 313 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 TMEM184BQ9Y519 407 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MAP1AP78559 2803 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SULT2B1O00204 365 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 XPNPEP2O43895 674 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SDC3O75056 442 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FGF9P31371 208 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SYPL1Q16563 259 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GTDC1Q4AE62 458 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 FAM181AQ8N9Y4 354 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 NRG4Q8WWG1 115 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 JAM3Q9BX67 310 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CD93Q9NPY3 652 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 MRPS7Q9Y2R9 242 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 EML6Q6ZMW3 1958 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 IGHV1OR21-1A0A087WYE8 117 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GNAO1P09471 354 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC35F1Q5T1Q4 408 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 RNLSQ5VYX0 342 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PGBD2Q6P3X8 592 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DPPA2Q7Z7J5 298 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF433Q8N7K0 673 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LRRC3BQ96PB8 259 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LDAHQ9H6V9 325 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC7A7Q9UM01 511 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CBR3O75828 277 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 UGT2B10P36537 528 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CTXN1P60606 82 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 LSM3P62310 102 aaKnown RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SCRN3Q0VDG4 424 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 CEBPEQ15744 281 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 DUSP5Q16690 384 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 JMJD6Q6NYC1 403 aaPredicted RBP3.13□□□□□ -1.91
VPS13C-203ENST00000395896 ZNF620Q6ZNG0 422 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 USP51Q70EK9 711 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 PRSS42Q7Z5A4 293 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 GATAD2BQ8WXI9 593 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 SLC6A20Q9NP91 592 aa3.13□□□□□ -1.91
VPS13C-203ENST00000395896 A0A1B0GTL3 188 aa3.13□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 35.3 ms