RNA–Protein interactions for RNA: ENST00000395860.6

VCPKMT-202, Transcript of valosin containing protein lysine methyltransferase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VCPKMT, Length 1,761 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCPKMT-202ENST00000395860 HK1P19367 917 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 RPS5P46782 204 aaKnown RBP18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC9A3P48764 834 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 CHN2P52757 468 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 CDC42P60953 191 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 ISL1P61371 349 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 GINS1Q14691 196 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 TOMM20Q15388 145 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 RPL13AP3Q6NVV1 102 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 C5orf46Q6UWT4 87 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SPACA3Q8IXA5 215 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 MDS2Q8NDY4 140 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 OR51A7Q8NH64 312 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 POC1BQ8TC44 478 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 OR52D1Q9H346 318 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 KLHL1Q9NR64 748 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SERINC1Q9NRX5 453 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 BOKQ9UMX3 212 aaPredicted RBP18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SIGLEC7Q9Y286 467 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SSUH2Q9Y2M2 353 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 SPTBN2O15020 2390 aa18.48■□□□□ 0.55
VCPKMT-202ENST00000395860 TRAV36DV7A0A075B6V5 113 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 TRAV27A0A087WT01 109 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ZC3H12DA2A288 527 aaKnown RBP18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 HCN1O60741 890 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 RCBTB2O95199 551 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ADRB1P08588 477 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CD46P15529 392 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 BMP7P18075 431 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ADH6P28332 368 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 EIF2S3P41091 472 aaKnown RBP18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF74Q16587 644 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 BROXQ5VW32 411 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SLX4IPQ5VYV7 408 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC25A25Q6KCM7 469 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC27A4Q6P1M0 643 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC46A3Q7Z3Q1 461 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CCDC71Q8IV32 467 aaPredicted RBP18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 DEPDC4Q8N2C3 294 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 IQCF1Q8N6M8 205 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 LRRC17Q8N6Y2 441 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 OR2M7Q8NG81 312 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 OR52L1Q8NGH7 329 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 OR8D4Q8NGM9 314 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 OR5M1Q8NGP8 315 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 STK35Q8TDR2 534 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SAMD8Q96LT4 415 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 C5orf34Q96MH7 638 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 TSSK6Q9BXA6 273 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 HES7Q9BYE0 225 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 NANSQ9NR45 359 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 IMPAD1Q9NX62 359 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 KLF13Q9Y2Y9 288 aaPredicted RBP18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF337Q9Y3M9 751 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SP1P08047 785 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 PLA2G5P39877 138 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 GIPRP48546 466 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 MAP2K6P52564 334 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SMSP52788 366 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CDK5Q00535 292 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 MYBPC1Q00872 1141 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CD47Q08722 323 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ZBED5Q49AG3 693 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CLEC12AQ5QGZ9 265 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 C1orf140Q5VVS0 124 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SMARCD3Q6STE5 483 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 CASP12Q6UXS9 341 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SULF2Q8IWU5 870 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ATP6V1C2Q8NEY4 427 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 TAAR8Q969N4 342 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 DDIT4LQ96D03 193 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 DCBLD2Q96PD2 775 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 TNFRSF13CQ96RJ3 184 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 OR11A1Q9GZK7 315 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 SLC25A19Q9HC21 320 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 ZFP64Q9NPA5 681 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 IL20RAQ9UHF4 553 aa18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 RPH3AQ9Y2J0 694 aaPredicted RBP18.47■□□□□ 0.55
VCPKMT-202ENST00000395860 PINLYPA6NC86 204 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 LRRC3CA6NJW4 275 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 RRP8O43159 456 aaKnown RBP18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF208O43345 1280 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 PTP4A3O75365 173 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 CEACAM4O75871 244 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 AHSA1O95433 338 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF800Q2TB10 664 aaPredicted RBP eCLIP18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 C12orf73Q69YU5 71 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 ZNF786Q8N393 782 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 GATA6Q92908 595 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 DTNBP1Q96EV8 351 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 DNAJA3Q96EY1 480 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 MOGAT1Q96PD6 335 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 RASSF1Q9NS23 344 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 RNF6Q9Y252 685 aa18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 SPIN1Q9Y657 262 aaPredicted RBP18.46■□□□□ 0.55
VCPKMT-202ENST00000395860 NME2P1O60361 137 aa18.45■□□□□ 0.54
VCPKMT-202ENST00000395860 NPIPB7O75200 414 aa18.45■□□□□ 0.54
VCPKMT-202ENST00000395860 NME2P22392 152 aa18.45■□□□□ 0.54
VCPKMT-202ENST00000395860 ELK4P28324 431 aa18.45■□□□□ 0.54
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms