RNA–Protein interactions for RNA: ENST00000395823.2

HMGB1P10-201, Transcript of high mobility group box 1 pseudogene 10, humanhuman

BASIC

Gene HMGB1P10, Length 563 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P10-201ENST00000395823 GTSF1Q8WW33 167 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ST8SIA1Q92185 356 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 RASL10AQ92737 203 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 TOMM40LQ969M1 308 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 MSANTD3Q96H12 275 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 TIMD4Q96H15 378 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 C12orf42Q96LP6 360 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 C1orf147Q96MC9 270 aaPredicted RBP3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 IL4I1Q96RQ9 567 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 CCT8L2Q96SF2 557 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 CHRDL1Q9BU40 450 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 TRIM62Q9BVG3 475 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ELOVL4Q9GZR5 314 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 GLT8D2Q9H1C3 349 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 EXO5Q9H790 373 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ZFP14Q9HCL3 533 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 LZTFL1Q9NQ48 299 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 SENP1Q9P0U3 644 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 PISDQ9UG56 409 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 PRSS21Q9Y6M0 314 aa3.84□□□□□ -1.79
HMGB1P10-201ENST00000395823 ATP10AO60312 1499 aa3.84□□□□□ -1.8
HMGB1P10-201ENST00000395823 UNC13AQ9UPW8 1703 aa3.84□□□□□ -1.8
HMGB1P10-201ENST00000395823 A0A1B0GWB2 263 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 B4DXG7 233 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 HSBP1L1C9JCN9 74 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 CXCL13O43927 109 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 WBP4O75554 376 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 LYPD3O95274 346 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PGK1P00558 417 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 HSMCR30P0CW71 290 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 RALBP11234 206 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 GCFC2P16383 781 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 HMGB2P26583 209 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 GCAP28676 217 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 ADORA2BP29275 332 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 RPL13AP40429 203 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 MAGEA9P43362 315 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 TPMTP51580 245 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 EFNA3P52797 238 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PRMT2P55345 433 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 MRPS11P82912 194 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 DNAJC3Q13217 504 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 GRB7Q14451 532 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 C6orf226Q5I0X4 101 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 C1orf185Q5T7R7 199 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PRAMEF5Q5TYX0 476 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PRAMEF6Q5VXH4 476 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 C6orf89Q6UWU4 347 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 SERINC5Q86VE9 423 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 ZNF321PQ8N8H1 164 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 ATP6V0D2Q8N8Y2 350 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 NECAB1Q8N987 351 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 RAB3IL1Q8TBN0 382 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PSMB7Q99436 277 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 UQCC2Q9BRT2 126 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 SPZ1Q9BXG8 430 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 CHIAQ9BZP6 476 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 PKIBQ9C010 78 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 NAT10Q9H0A0 1025 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 VCX3BQ9H321 246 aa3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 WARS2Q9UGM6 360 aaKnown RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 RPAP1Q9BWH6 1393 aaPredicted RBP3.83□□□□□ -1.8
HMGB1P10-201ENST00000395823 TDRD15B5MCY1 1934 aaKnown RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 SNED1Q8TER0 1413 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 KANK1Q14678 1352 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 TNIKQ9UKE5 1360 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 A0A075B6Q4 140 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 A0A1B0GU03 582 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 A0A1W2PQ72 361 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 VGLL3A8MV65 326 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 SULT2B1O00204 365 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 RGS16O15492 202 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 UPK3AO75631 287 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 CRTAPO75718 401 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 UGT2B17O75795 530 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 DUSP14O95147 198 aaKnown RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 CLDN9O95484 217 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 GNA14O95837 355 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 OTCP00480 354 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 AGTP01019 485 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 IVLP07476 585 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 STAG3L3P0CL85 134 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 ATP1B2P14415 290 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 FGF9P31371 208 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 PTGDSP41222 190 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 RPL29P47914 159 aaKnown RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 LMO4P61968 165 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 MRPS15P82914 257 aaKnown RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 CDK16Q00536 496 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 GK3PQ14409 553 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 QRICH1Q2TAL8 776 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 TRIM16LQ309B1 348 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 DMRTC1Q5HYR2 192 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 CLEC2AQ6UVW9 174 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 CXCL17Q6UXB2 119 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 KDM7AQ6ZMT4 941 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 TMCO2Q7Z6W1 182 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 FAM83FQ8NEG4 500 aaPredicted RBP3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 TRPV1Q8NER1 839 aa3.82□□□□□ -1.8
HMGB1P10-201ENST00000395823 SDR9C7Q8NEX9 313 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 71.8 ms