RNA–Protein interactions for RNA: ENST00000395740.5

FGD4-201, Transcript of FYVE, RhoGEF and PH domain containing 4, humanhuman

TSL 1 (best)

Gene FGD4, Length 2,691 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FGD4-201ENST00000395740 ANKRD34CP0C6C1 535 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 MGMTP16455 207 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 LAG3P18627 525 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 HIST1H1TP22492 207 aaPredicted RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 GABRR2P28476 465 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 SLC6A6P31641 620 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 CCR6P51684 374 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 VSX2P58304 361 aaPredicted RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 PPP2CBP62714 309 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 PPP2CAP67775 309 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 SIRPAP78324 504 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 CRYZQ08257 329 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 HTR4Q13639 388 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 LASP1Q14847 261 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 RBMS2Q15434 407 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 PLBD1Q6P4A8 553 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ABHD17CQ6PCB6 329 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 GSG1LQ6UXU4 331 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 GAREM2Q75VX8 874 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ERN2Q76MJ5 926 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 SHFQ7M4L6 423 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 TRMT11Q7Z4G4 463 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 CMTM4Q8IZR5 234 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 CMTM8Q8IZV2 173 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 BBS1Q8NFJ9 593 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 OR6C4Q8NGE1 309 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 OR2L8Q8NGY9 312 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 TMEM239Q8WW34 195 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 SMPDL3BQ92485 455 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 TFGQ92734 400 aaPredicted RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 GHSRQ92847 366 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 NUS1Q96E22 293 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ELMOD3Q96FG2 381 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 C4orf36Q96KX1 117 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 STACQ99469 402 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 DDOQ99489 341 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ZNF559Q9BR84 538 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ZNF426Q9BUY5 554 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ZNF416Q9BWM5 594 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 SORBS1Q9BX66 1292 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 GSDMCQ9BYG8 508 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 TTYH1Q9H313 450 aaPredicted RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 BRD7Q9NPI1 651 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 OPN4Q9UHM6 478 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 ASF1AQ9Y294 204 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 YBX2Q9Y2T7 364 aaKnown RBP4.69□□□□□ -1.66
FGD4-201ENST00000395740 HRH3Q9Y5N1 445 aa4.69□□□□□ -1.66
FGD4-201ENST00000395740 TP53BP1Q12888 1972 aaPredicted RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 SPTBN5Q9NRC6 3674 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 A0A087WV62 115 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 A0A0B4J203 849 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 RFPL4AA6NLU0 287 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 IFITM5A6NNB3 132 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 RFPL4AL1F8VTS6 287 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 PRICKLE3O43900 615 aaPredicted RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 GMDSO60547 372 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 RAD1O60671 282 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 CTNSO60931 367 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 RNGTTO60942 597 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 SDC3O75056 442 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 RDH16O75452 317 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 KHDRBS3O75525 346 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 SCO1O75880 301 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 CD8AP01732 235 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 ALDOBP05062 364 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 CSF1P09603 554 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 SLC25A4P12235 298 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 PRG2P13727 222 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 GJA1P17302 382 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 HLA-GP17693 338 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 SRMP19623 302 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 ATP5A1P25705 553 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 MPGP29372 298 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 CTHP32929 405 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 SSR2P43308 183 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 GPR1P46091 355 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 GPR4P46093 362 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 PTH2RP49190 550 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 GDI2P50395 445 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 OR10A3P58181 314 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 FXYD6P3P58550 94 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 RPS11P62280 158 aaKnown RBP eCLIP4.68□□□□□ -1.66
FGD4-201ENST00000395740 MAT1AQ00266 395 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 MEF2AQ02078 507 aaPredicted RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 STX4Q12846 297 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 GRIN2CQ14957 1233 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 AMZ1Q400G9 498 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 ELP2Q6IA86 826 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 MFSD12Q6NUT3 480 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 FIP1L1Q6UN15 594 aaKnown RBP4.68□□□□□ -1.66
FGD4-201ENST00000395740 Q6ZTK2 550 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 MOB3CQ70IA8 216 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 KRT77Q7Z794 578 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 DEFB128Q7Z7B8 93 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 AMZ2Q86W34 360 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 VRK2Q86Y07 508 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 NRROSQ86YC3 692 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 ZNF547Q8IVP9 402 aa4.68□□□□□ -1.66
FGD4-201ENST00000395740 SLC35F3Q8IY50 421 aa4.68□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms