RNA–Protein interactions for RNA: ENST00000395060.5

CLIP2-203, Transcript of CAP-Gly domain containing linker protein 2, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLIP2, Length 3,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLIP2-203ENST00000395060 LDB3O75112 727 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 STX11O75558 287 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 AKR1C2P52895 323 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 AKR1C1Q04828 323 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 ATXN7L3Q14CW9 347 aaPredicted RBP13.21□□□□□ -0.29
CLIP2-203ENST00000395060 NHLRC3Q5JS37 347 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 SLC22A10Q63ZE4 541 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 HDDC3Q8N4P3 179 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 SMIM4Q8WVI0 70 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 DVL3Q92997 716 aaPredicted RBP13.21□□□□□ -0.29
CLIP2-203ENST00000395060 MNTQ99583 582 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 TAS2R10Q9NYW0 307 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 HRH3Q9Y5N1 445 aa13.21□□□□□ -0.29
CLIP2-203ENST00000395060 GOSR2O14653 212 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 RAD1O60671 282 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 RASGRP1O95267 797 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 ADRB3P13945 408 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 RPL35P42766 123 aaKnown RBP13.21□□□□□ -0.3
CLIP2-203ENST00000395060 TMEM69Q5SWH9 247 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.21□□□□□ -0.3
CLIP2-203ENST00000395060 OR52H1Q8NGJ2 320 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 OR2A1Q8NGT9 310 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 SYNPRQ8TBG9 265 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 MARVELD3Q96A59 401 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 PRSS27Q9BQR3 290 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 ZBP1Q9H171 429 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 IL21RQ9HBE5 538 aa13.21□□□□□ -0.3
CLIP2-203ENST00000395060 APOBEC3BQ9UH17 382 aaKnown RBP13.21□□□□□ -0.3
CLIP2-203ENST00000395060 LRRC72A6NJI9 287 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 SLC22A31A6NKX4 558 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 PYCARD-AS1I3L0S3 204 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 SUSD5O60279 629 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 LILRB3O75022 631 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 LIPCP11150 499 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MAT2AP31153 395 aaKnown RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 SRSF5Q13243 272 aaKnown RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 HLXQ14774 488 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MLF2Q15773 248 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 DEFB134Q4QY38 66 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ABHD17CQ6PCB6 329 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MTSS1LQ765P7 747 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF454Q8N9F8 522 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 OR4D10Q8NGI6 311 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 WNT2BQ93097 391 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 CFHR5Q9BXR6 569 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ACTRT3Q9BYD9 372 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 PRDM7Q9NQW5 492 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 COPZ2Q9P299 210 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 CAMK2AQ9UQM7 478 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MFSD2BA6NFX1 497 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 H0YC42 278 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 KLF4O43474 513 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 PAK4O96013 591 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 EGFP01133 1207 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ADH1AP07327 375 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 IL32P24001 234 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 BMP8BP34820 402 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF136P52737 540 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 NRG3P56975 720 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 ERVK-21P61565 698 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 EXOSC7Q15024 291 aaKnown RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 NNATQ16517 81 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 DCAF12L2Q5VW00 463 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 BMP8AQ7Z5Y6 402 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 CDK20Q8IZL9 346 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 CXorf40AQ8TE69 158 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MICU1Q9BPX6 476 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MEPEQ9NQ76 525 aaPredicted RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 REV3LO60673 3130 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 TRPM6Q9BX84 2022 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MTCL1Q9Y4B5 1905 aaKnown RBP13.2□□□□□ -0.3
CLIP2-203ENST00000395060 PRUNE2Q8WUY3 3088 aa13.2□□□□□ -0.3
CLIP2-203ENST00000395060 MCRIP1C9JLW8 97 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 PRKNO60260 465 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 CREBL2O60519 120 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 KRT33AO76009 404 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 MAS1P04201 325 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ATP1B1P05026 303 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ZP3P21754 424 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 RPL4P36578 427 aaKnown RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 PRDX1Q06830 199 aaKnown RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF273Q14593 569 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TMEM44Q2T9K0 475 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 DMKNQ6E0U4 476 aaPredicted RBP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 SLC48A1Q6P1K1 146 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TPRA1Q86W33 373 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 WBP1Q96G27 269 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TSSK2Q96PF2 358 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 FAM83CQ9BQN1 747 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 SLC7A5P2Q9GIP4 190 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 PELI2Q9HAT8 420 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP13.19□□□□□ -0.3
CLIP2-203ENST00000395060 FAM74A7A6NL05 159 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 GMFGO60234 142 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 RP2O75695 350 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 IFNA16P05015 189 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 ZNF3P17036 446 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 VIPR2P41587 438 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 TPMTP51580 245 aa13.19□□□□□ -0.3
CLIP2-203ENST00000395060 FAM74A3Q4VXF1 159 aa13.19□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 33.4 ms