RNA–Protein interactions for RNA: ENST00000394888.8

CPSF7-202, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

APPRIS P4 TSL 2 BASIC

Gene CPSF7, Length 3,650 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-202ENST00000394888 RACK1P63244 317 aaKnown RBP14.08□□□□□ -0.16
CPSF7-202ENST00000394888 CBLN3Q6UW01 205 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 UNQ9370/PRO34162Q6UXP9 181 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 PARGQ86W56 976 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 OR52L1Q8NGH7 329 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 OR51V1Q9H2C8 321 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 BOLA1Q9Y3E2 137 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 SLC2A2P11168 524 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-202ENST00000394888 SLC37A1P57057 533 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 NANOS3P60323 173 aaKnown RBP14.08□□□□□ -0.16
CPSF7-202ENST00000394888 TBRG1Q3YBR2 411 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 KLHL12Q53G59 568 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 MED25Q71SY5 747 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 ATG4DQ86TL0 474 aaPredicted RBP14.08□□□□□ -0.16
CPSF7-202ENST00000394888 DTX3Q8N9I9 347 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 LIPHQ8WWY8 451 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 MOGAT1Q96PD6 335 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 OR10A5Q9H207 317 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 ERVK-19Q9WJR5 959 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 KLHDC2Q9Y2U9 406 aa14.08□□□□□ -0.16
CPSF7-202ENST00000394888 A0A1B0GVC2 190 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 A6NIN4 97 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 COQ9O75208 318 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ADRB1P08588 477 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 TCEA1P23193 301 aaKnown RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ATP12AP54707 1039 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 MOSPD2Q8NHP6 518 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 GHSRQ92847 366 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ZMYND19Q96E35 227 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 SPRTNQ9H040 489 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 EVA1AQ9H8M9 152 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 UCK1Q9HA47 277 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 CAPN10Q9HC96 672 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ATF1P18846 271 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 CFL1P23528 166 aaKnown RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 HLA-DMAP28067 261 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 SLC6A1P30531 599 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 MLLT3P42568 568 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ULK3Q6PHR2 472 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 RTL4Q6ZR62 310 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 LIX1LQ8IVB5 337 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 METTL27Q8N6F8 245 aaPredicted RBP14.07□□□□□ -0.16
CPSF7-202ENST00000394888 OR14A16Q8NHC5 309 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 OTULINQ96BN8 352 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 RASD1Q9Y272 281 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 ALG5Q9Y673 324 aa14.07□□□□□ -0.16
CPSF7-202ENST00000394888 GNB5O14775 395 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 SELENOFO60613 162 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 IGKV3-11P04433 115 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 CSRP1P21291 193 aaKnown RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 MYL9P24844 172 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 UQCRC1P31930 480 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 IFNA8P32881 189 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ACVR1BP36896 505 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ARL9Q6T311 187 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 GATAD2AQ86YP4 633 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ZNF595Q8IYB9 648 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ZNF655Q8N720 491 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 OR52E2Q8NGJ4 325 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 OR51L1Q8NGJ5 315 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 OR4K13Q8NH42 304 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 CSTF2TQ9H0L4 616 aaKnown RBP eCLIP14.06□□□□□ -0.168e-9■■□□□ 12.1
CPSF7-202ENST00000394888 KRCC1Q9NPI7 259 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 KNL1Q8NG31 2342 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 SERINC4A6NH21 518 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 DCTN6O00399 190 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 APOA1P02647 267 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 NPR2P20594 1047 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 CDKN2AP42771 156 aaKnown RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 CDK5R1Q15078 307 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 TP53I3Q53FA7 332 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 GPR135Q8IZ08 494 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ADIPOR1Q96A54 375 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 RASD2Q96D21 266 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 MAP6Q96JE9 813 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 TRIM2Q9C040 744 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 TRIM36Q9NQ86 728 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ZNF221Q9UK13 617 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 IER3IP1Q9Y5U9 82 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ZNF749O43361 778 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 NME1P15531 152 aaKnown RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 BMP7P18075 431 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ADH7P40394 386 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 MAP2K3P46734 347 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 NRG3P56975 720 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 SYT13Q7L8C5 426 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 OR51Q1Q8NH59 317 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ZDHHC19Q8WVZ1 309 aaPredicted RBP14.06□□□□□ -0.16
CPSF7-202ENST00000394888 SNX18Q96RF0 628 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 NMNAT3Q96T66 252 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 MFRPQ9BY79 579 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 TMEM27Q9HBJ8 222 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 ACOXLQ9NUZ1 547 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 NOX1Q9Y5S8 564 aa14.06□□□□□ -0.16
CPSF7-202ENST00000394888 MT-ND5P03915 603 aa14.05□□□□□ -0.16
CPSF7-202ENST00000394888 UCHL1P09936 223 aa14.05□□□□□ -0.16
CPSF7-202ENST00000394888 RNH1P13489 461 aaKnown RBP14.05□□□□□ -0.16
CPSF7-202ENST00000394888 SLC3A1Q07837 685 aa14.05□□□□□ -0.16
CPSF7-202ENST00000394888 TATDN3Q17R31 274 aa14.05□□□□□ -0.16
CPSF7-202ENST00000394888 LAMTOR1Q6IAA8 161 aa14.05□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms