RNA–Protein interactions for RNA: ENST00000394817.6

SIL1-202, Transcript of SIL1 nucleotide exchange factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SIL1, Length 1,923 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SIL1-202ENST00000394817 CD226Q15762 336 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 DPY19L2P2Q6ZN68 376 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 VASH1Q7L8A9 365 aaPredicted RBP17.04■□□□□ 0.32
SIL1-202ENST00000394817 LRRC17Q8N6Y2 441 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 CELF2-AS1Q8N7Q2 184 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 FAM98AQ8NCA5 519 aaKnown RBP17.04■□□□□ 0.32
SIL1-202ENST00000394817 DNASE2BQ8WZ79 361 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 C4orf36Q96KX1 117 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 NXF5Q9H1B4 397 aaKnown RBP17.04■□□□□ 0.32
SIL1-202ENST00000394817 ERVMER34-1Q9H9K5 563 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 COMMD3Q9UBI1 195 aa17.04■□□□□ 0.32
SIL1-202ENST00000394817 SEC16AO15027 2179 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 ASXL3Q9C0F0 2248 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 IGKV1D-42A0A075B6H8 117 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 FRG2CA6NGY1 282 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 LRRN3E7EW58 273 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 E9PI62 339 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 DVL2O14641 736 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 DYRK3O43781 588 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 TMCC2O75069 709 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 NCR1O76036 304 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 IGKV3-11P04433 115 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 CSF3P09919 207 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 UBL4AP11441 157 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 RORAP35398 523 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 CBX3Q13185 183 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 ISXQ2M1V0 245 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 WBP2NLQ6ICG8 309 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 NRARPQ7Z6K4 114 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 TMEM151BQ8IW70 566 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 POMGNT2Q8NAT1 580 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 IL17RDQ8NFM7 739 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 OR4K13Q8NH42 304 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 TSLPQ969D9 159 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 SOSTQ9BQB4 213 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 YIPF2Q9BWQ6 316 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 DUSP15Q9H1R2 295 aaPredicted RBP17.03■□□□□ 0.32
SIL1-202ENST00000394817 LRRN3Q9H3W5 708 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 SYNDIG1Q9H7V2 258 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 SACM1LQ9NTJ5 587 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 NOX1Q9Y5S8 564 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 IER3IP1Q9Y5U9 82 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 UNC13CQ8NB66 2214 aa17.03■□□□□ 0.32
SIL1-202ENST00000394817 ARPC3O15145 178 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 BCAT2O15382 392 aaPredicted RBP17.02■□□□□ 0.32
SIL1-202ENST00000394817 DUX1O43812 170 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 PNMTP11086 282 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 HPGDP15428 266 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 RFX2P48378 723 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 ASAH1Q13510 395 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 ZNF800Q2TB10 664 aaPredicted RBP eCLIP17.02■□□□□ 0.32
SIL1-202ENST00000394817 MZT2AQ6P582 158 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 ARL9Q6T311 187 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 METAP1DQ6UB28 335 aaPredicted RBP17.02■□□□□ 0.32
SIL1-202ENST00000394817 ATG4DQ86TL0 474 aaPredicted RBP17.02■□□□□ 0.32
SIL1-202ENST00000394817 AKAP14Q86UN6 197 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 PLXDC1Q8IUK5 500 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 D2HGDHQ8N465 521 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 GATSQ8NAP1 163 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 ZDHHC19Q8WVZ1 309 aaPredicted RBP17.02■□□□□ 0.32
SIL1-202ENST00000394817 GPX7Q96SL4 187 aaPredicted RBP17.02■□□□□ 0.32
SIL1-202ENST00000394817 TMEM43Q9BTV4 400 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 NRIP3Q9NQ35 241 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 SEMA5BQ9P283 1151 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 ADAM18Q9Y3Q7 739 aa17.02■□□□□ 0.32
SIL1-202ENST00000394817 A0A1B0GVT2 93 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 SCDO00767 359 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 PRKNO60260 465 aaPredicted RBP17.02■□□□□ 0.31
SIL1-202ENST00000394817 HPGDSO60760 199 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 DDAH2O95865 285 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 ALAS2P22557 587 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 PTBP1P26599 531 aaKnown RBP eCLIP17.02■□□□□ 0.319e-7■■■■■ 27.6
SIL1-202ENST00000394817 ARL4DP49703 201 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 TPTEP56180 551 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 CFHR1Q03591 330 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 SELENBP1Q13228 472 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 ELAVL1Q15717 326 aaKnown RBP17.02■□□□□ 0.31
SIL1-202ENST00000394817 LCN1P1Q5VSP4 162 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 CNIH2Q6PI25 160 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 SPATC1Q76KD6 591 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 SSX6Q7RTT6 188 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 OR1L3Q8NH93 324 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 PHOSPHO1Q8TCT1 267 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 ZNF721Q8TF20 911 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 ADIPOR1Q96A54 375 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 LCORQ96JN0 433 aaPredicted RBP17.02■□□□□ 0.31
SIL1-202ENST00000394817 PGLYRP3Q96LB9 341 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 OR8D2Q9GZM6 311 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 DHCR7Q9UBM7 475 aaKnown RBP17.02■□□□□ 0.31
SIL1-202ENST00000394817 GRIP1Q9Y3R0 1128 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 CLCA3PQ9Y6N3 262 aa17.02■□□□□ 0.31
SIL1-202ENST00000394817 RP1P56715 2156 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 MYO15AQ9UKN7 3530 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 ELOA3DA6NLF2 546 aaPredicted RBP17.01■□□□□ 0.31
SIL1-202ENST00000394817 J3QLW9 94 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 OIP5O43482 229 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 SC5DO75845 299 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 UTS2O95399 124 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 TFP02787 698 aa17.01■□□□□ 0.31
SIL1-202ENST00000394817 ATXN8OSP0DMR3 200 aa17.01■□□□□ 0.31
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms