RNA–Protein interactions for RNA: ENST00000393773.7

CHMP3-202, Transcript of charged multivesicular body protein 3, humanhuman

TSL 3

Gene CHMP3, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP3-202ENST00000393773 FBXO17Q96EF6 278 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 DUSP26Q9BV47 211 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 SLC35A3Q9Y2D2 325 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 SLC9A8Q9Y2E8 581 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 DYSFO75923 2080 aa13.42□□□□□ -0.26
CHMP3-202ENST00000393773 CFLARO15519 480 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 NPHS1O60500 1241 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 PGRP06401 933 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 KRT4P19013 534 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 PRPS1L1P21108 318 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 MATN1P21941 496 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 ARRB2P32121 409 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 MAGEA8P43361 318 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 C1QTNF12Q5T7M4 302 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 TSPO2Q5TGU0 170 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 IL23RQ5VWK5 629 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 FRRS1Q6ZNA5 592 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 C16orf62Q7Z3J2 963 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 C6orf120Q7Z4R8 191 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 ADGRG3Q86Y34 549 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 ANKS4BQ8N8V4 417 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 AGR3Q8TD06 166 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 MIPOL1Q8TD10 442 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 OR51I1Q9H343 314 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 MYOZ1Q9NP98 299 aaPredicted RBP13.41□□□□□ -0.26
CHMP3-202ENST00000393773 EXOSC3Q9NQT5 275 aaKnown RBP13.41□□□□□ -0.26
CHMP3-202ENST00000393773 MOKQ9UQ07 419 aa13.41□□□□□ -0.26
CHMP3-202ENST00000393773 LOC390937A0A1W2PQ73 354 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 DUXAA6NLW8 204 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 GUSBP08236 651 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 IMPDH2P12268 514 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 ZNF23P17027 643 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 MPGP29372 298 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 RYKP34925 604 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 CLK1P49759 484 aaKnown RBP13.4□□□□□ -0.26
CHMP3-202ENST00000393773 OR2B6P58173 313 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 SNRPD2P62316 118 aaKnown RBP13.4□□□□□ -0.26
CHMP3-202ENST00000393773 SLC17A1Q14916 467 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 CR1LQ2VPA4 569 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 ATP6AP1LQ52LC2 224 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 AP1ARQ63HQ0 302 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 HOMEZQ8IX15 550 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 IFT20Q8IY31 132 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 FNDC5Q8NAU1 212 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 ZNF563Q8TA94 476 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 EPS8L3Q8TE67 593 aaKnown RBP13.4□□□□□ -0.26
CHMP3-202ENST00000393773 TMEM45BQ96B21 275 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 BOD1Q96IK1 185 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 FOXN4Q96NZ1 517 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 MECRQ9BV79 373 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 BPESC1Q9GZL8 116 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 SAP130Q9H0E3 1048 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 MKS1Q9NXB0 559 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 TMEM181Q9P2C4 612 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 UPB1Q9UBR1 384 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 TRAPPC4Q9Y296 219 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 WDR45Q9Y484 360 aa13.4□□□□□ -0.26
CHMP3-202ENST00000393773 IGHV1-18A0A0C4DH31 117 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 SMIM23A6NLE4 172 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 CLDN24A6NM45 220 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 AP3D1O14617 1153 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 SKAP2O75563 359 aaPredicted RBP13.39□□□□□ -0.27
CHMP3-202ENST00000393773 TGFAP01135 160 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 G6PDP11413 515 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 FKBP2P26885 142 aaKnown RBP13.39□□□□□ -0.27
CHMP3-202ENST00000393773 ALDH3A1P30838 453 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 PRPS1P60891 318 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 TGFBR3Q03167 851 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 SQLEQ14534 574 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 HIKESHIQ53FT3 197 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 HMGN2P46Q86SG4 172 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 MEX3DQ86XN8 651 aaKnown RBP13.39□□□□□ -0.27
CHMP3-202ENST00000393773 C1orf159Q96HA4 380 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 APOPT1Q96IL0 206 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 PRPF18Q99633 342 aaKnown RBP13.39□□□□□ -0.27
CHMP3-202ENST00000393773 POLE3Q9NRF9 147 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 EXD2Q9NVH0 621 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 PCDHGB4Q9UN71 923 aa13.39□□□□□ -0.27
CHMP3-202ENST00000393773 TMED7-TICAM2A0A0A6YYA0 188 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 TMEM72A0PK05 275 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ZC3H12DA2A288 527 aaKnown RBP13.38□□□□□ -0.27
CHMP3-202ENST00000393773 EIF1BO60739 113 aaKnown RBP13.38□□□□□ -0.27
CHMP3-202ENST00000393773 PDE5AO76074 875 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 SLU7O95391 586 aaKnown RBP13.38□□□□□ -0.27
CHMP3-202ENST00000393773 WNT11O96014 354 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 CCNA2P20248 432 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 PPOXP50336 477 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 SLC35A1P78382 337 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ADIPOQQ15848 244 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 CARTPTQ16568 116 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ZSWIM7Q19AV6 140 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 OR4F3Q6IEY1 312 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 TNFAIP8L2Q6P589 184 aaPredicted RBP13.38□□□□□ -0.27
CHMP3-202ENST00000393773 KLHL24Q6TFL4 600 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ZCCHC23Q6ZST2 131 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 SLC46A3Q7Z3Q1 461 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 RFLNBQ8N5W9 214 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ARFGAP2Q8N6H7 521 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ZIC4Q8N9L1 334 aa13.38□□□□□ -0.27
CHMP3-202ENST00000393773 ROPN1LQ96C74 230 aa13.38□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 45.9 ms