RNA–Protein interactions for RNA: ENST00000393368.2

HMGB3P1-201, Transcript of high mobility group box 3 pseudogene 1, humanhuman

BASIC

Gene HMGB3P1, Length 573 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P1-201ENST00000393368 CCT8L1PA6NM43 557 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 M0R3H8 397 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 FAAHO00519 579 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 AIM2O14862 343 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 TPST2O60704 377 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CYTIPO60759 359 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRKD3O94806 890 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 MFN2O95140 757 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 COX4I1P13073 169 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CXCR1P25024 350 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRKAR1BP31321 381 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 UGT2B10P36537 528 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CD79BP40259 229 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 HTR3AP46098 478 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CRYBA2P53672 197 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 PCBP3P57721 371 aaKnown RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 RAC3P60763 192 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 COPZ1P61923 177 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 SORDQ00796 357 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 RASGEF1BQ0VAM2 473 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CEACAM7Q14002 265 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 CYLC2Q14093 348 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 MAPRE2Q15555 327 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR7A5Q15622 319 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM201Q5SNT2 666 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ABLIM2Q6H8Q1 611 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ALKBH2Q6NS38 261 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 DHRS4L2Q6PKH6 230 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 TFAP2EQ6VUC0 442 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 NET1Q7Z628 596 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ATG4DQ86TL0 474 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 KRT73Q86Y46 540 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 KIF18BQ86Y91 864 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 RBM45Q8IUH3 476 aaKnown RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ARMC8Q8IUR7 673 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF440Q8IYI8 595 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 GPR32P1Q8NGA4 272 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR4D11Q8NGI4 311 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 VANGL1Q8TAA9 524 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 SLC25A43Q8WUT9 341 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 C3orf49Q96BT1 292 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 TAMM41Q96BW9 452 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 DDIT4LQ96D03 193 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 WFIKKN1Q96NZ8 548 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ADAM19Q9H013 955 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 LIME1Q9H400 295 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 PLSCR4Q9NRQ2 329 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 C6orf203Q9P0P8 240 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM181Q9P2C4 612 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 PRSS50Q9UI38 385 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 FOXD3Q9UJU5 478 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 SPIN1Q9Y657 262 aaPredicted RBP6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 ABCA12Q86UK0 2595 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 DOCK7Q96N67 2140 aa6.82□□□□□ -1.32
HMGB3P1-201ENST00000393368 A0A1B0GWA3 101 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 SH3D21A4FU49 640 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 A6NNC1 897 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF716A6NP11 495 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 BBIP1A8MTZ0 92 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM229AB2RXF0 380 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 M0QX08 132 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 SIAH2O43255 324 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CTAG2O75638 210 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 AKR7A3O95154 331 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 PMS2P2O95744 297 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 IGHV3-9P01782 118 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 YES1P07947 543 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 TNFRSF1BP20333 461 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CD247P20963 164 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 FPR1P21462 350 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CBLP22681 906 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ADSLP30566 484 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 NTF4P34130 210 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 PCGF2P35227 344 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 IDUAP35475 653 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 RGS8P57771 180 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CSNK2A1P68400 391 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 RNPS1Q15287 305 aaKnown RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 NPTX1Q15818 432 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 DUSP7Q16829 419 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 VMACQ2NL98 169 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 COQ5Q5HYK3 327 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 EEF1A1P5Q5VTE0 462 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 GTF2IRD2BQ6EKJ0 949 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 STAC2Q6ZMT1 411 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 GTF2IRD2Q86UP8 949 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 TSPYL5Q86VY4 417 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CXorf67Q86X51 503 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CALHM3Q86XJ0 350 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 TMEM99Q8N816 258 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 OR52E4Q8NGH9 312 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 RNF217Q8TC41 542 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 FAM222BQ8WU58 562 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 KTI12Q96EK9 354 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ZNF607Q96SK3 696 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ARHGDIGQ99819 225 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 SPATA5L1Q9BVQ7 753 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 CLEC4MQ9H2X3 399 aaPredicted RBP6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 ARMC7Q9H6L4 198 aa6.81□□□□□ -1.32
HMGB3P1-201ENST00000393368 BCO1Q9HAY6 547 aa6.81□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms