RNA–Protein interactions for RNA: ENST00000392456.3

CCDC50-202, Transcript of coiled-coil domain containing 50, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene CCDC50, Length 2,454 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC50-202ENST00000392456 FAM220BPB1ANY3 271 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 TBX19O60806 448 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 RBBP9O75884 186 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 MUC1P15941 1255 aaPredicted RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SOAT1P35610 550 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 AGFG1P52594 562 aaKnown RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 KCNAB1Q14722 419 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 ACER2Q5QJU3 275 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SERPINA11Q86U17 422 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 DNAJC22Q8N4W6 341 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 TTC29Q8NA56 475 aaPredicted RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 OR52E4Q8NGH9 312 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 NR4A3Q92570 626 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 CCDC3Q9BQI4 270 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 CNPPD1Q9BV87 410 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 GABARAPL1Q9H0R8 117 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 GLIPR2Q9H4G4 154 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 SIRT3Q9NTG7 399 aaPredicted RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 ASH2LQ9UBL3 628 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 ZNF282Q9UDV7 671 aaPredicted RBP17.54■□□□□ 0.4
CCDC50-202ENST00000392456 PHF11Q9UIL8 331 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 MAP4K5Q9Y4K4 846 aa17.54■□□□□ 0.4
CCDC50-202ENST00000392456 NUDT21O43809 227 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 DRD2P14416 443 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 FEN1P39748 380 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 FRKP42685 505 aaPredicted RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 RPS26P62854 115 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 SAP25Q8TEE9 199 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 TMEM41AQ96HV5 264 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 PLCXD1Q9NUJ7 323 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 C14orf105Q9NVL8 296 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 PCDHGB7Q9Y5F8 929 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 C7orf66A4D0T2 115 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 RHCEP18577 417 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 PAICSP22234 425 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 PTGFRP43088 359 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 TSFMP43897 325 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 DAPP51397 102 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 LIM2P55344 173 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 RAC1P63000 192 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 OPCMLQ14982 345 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 CARFQ8N187 725 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 ARHGEF39Q8N4T4 335 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 ZC3H10Q96K80 434 aaKnown RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 SFXN2Q96NB2 322 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 AMDHD1Q96NU7 426 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 ERMAPQ96PL5 475 aaPredicted RBP17.53■□□□□ 0.4
CCDC50-202ENST00000392456 PRR14Q9BWN1 585 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 SNTG1Q9NSN8 517 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 SEC14L3Q9UDX4 400 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 CLEC4AQ9UMR7 237 aa17.53■□□□□ 0.4
CCDC50-202ENST00000392456 SLC2A2P11168 524 aaPredicted RBP17.52■□□□□ 0.4
CCDC50-202ENST00000392456 GLB1P16278 677 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 CXCL3P19876 107 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 PVALBP20472 110 aaPredicted RBP17.52■□□□□ 0.4
CCDC50-202ENST00000392456 PTBP1P26599 531 aaKnown RBP eCLIP17.52■□□□□ 0.43e-9■■■■■ 49.6
CCDC50-202ENST00000392456 EPHA2P29317 976 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 CSF2RBP32927 897 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 CRATP43155 626 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 SF3A2Q15428 464 aaKnown RBP17.52■□□□□ 0.4
CCDC50-202ENST00000392456 TSTQ16762 297 aaKnown RBP17.52■□□□□ 0.4
CCDC50-202ENST00000392456 SLC48A1Q6P1K1 146 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 OR4N5Q8IXE1 308 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 ATP6V1C2Q8NEY4 427 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 SUN3Q8TAQ9 357 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 GGHQ92820 318 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 FAM162AQ96A26 154 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 FAIM2Q9BWQ8 316 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 ANKRA2Q9H9E1 313 aa17.52■□□□□ 0.4
CCDC50-202ENST00000392456 TEX46H3BTG2 121 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 SGK494L7N484 410 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 KDM4BO94953 1096 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 GABRA4P48169 554 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 KHDRBS1Q07666 443 aaKnown RBP eCLIP17.52■□□□□ 0.39
CCDC50-202ENST00000392456 VMACQ2NL98 169 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 CD276Q5ZPR3 534 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 ZNF367Q7RTV3 350 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 NANOGP1Q8N7R0 232 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 OR5P2Q8WZ92 322 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 CRELD1Q96HD1 420 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 PITX2Q99697 317 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 BARD1Q99728 777 aaKnown RBP17.52■□□□□ 0.39
CCDC50-202ENST00000392456 VRK1Q99986 396 aaPredicted RBP17.52■□□□□ 0.39
CCDC50-202ENST00000392456 MAGIXQ9H6Y5 334 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 DCAF13Q9NV06 445 aaKnown RBP17.52■□□□□ 0.39
CCDC50-202ENST00000392456 SUSD2Q9UGT4 822 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 ING1Q9UK53 422 aaPredicted RBP17.52■□□□□ 0.39
CCDC50-202ENST00000392456 DAPP1Q9UN19 280 aa17.52■□□□□ 0.39
CCDC50-202ENST00000392456 LY6G6EA0A0G2JKS1 128 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 A0A1W2PQL4 384 aaPredicted RBP17.51■□□□□ 0.39
CCDC50-202ENST00000392456 D6RAR5 112 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 FAM227AF5H4B4 570 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 RGS11O94810 467 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 LY86O95711 162 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 SIM1P81133 766 aaPredicted RBP17.51■□□□□ 0.39
CCDC50-202ENST00000392456 TGM3Q08188 693 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 MLIPQ5VWP3 458 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 TMEM52Q8NDY8 209 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 AKR7LQ8NHP1 331 aa17.51■□□□□ 0.39
CCDC50-202ENST00000392456 CPNE4Q96A23 557 aaPredicted RBP17.51■□□□□ 0.39
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms