RNA–Protein interactions for RNA: ENST00000390993.1

SNORD28B-201, Transcript of small nucleolar RNA, C/D box 28B, humanhuman

BASIC

Gene SNORD28B, Length 75 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD28B-201ENST00000390993 STRAPQ9Y3F4 350 aaKnown RBP0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 MMACHCQ9Y4U1 282 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 HEBP2Q9Y5Z4 205 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC25A15Q9Y619 301 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ALG6Q9Y672 507 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 PLEKHH1Q9ULM0 1364 aa0.65□□□□□ -2.31
SNORD28B-201ENST00000390993 ATP10DQ9P241 1426 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PCM1Q15154 2024 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IGLV3-12A0A075B6K2 115 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IGHV1OR21-1A0A087WYE8 117 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IGHV2-70DA0A0C4DH43 119 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IGKV2-24A0A0C4DH68 120 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 A0A0G2JRQ6 117 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CFAP73A6NFT4 308 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 A6NIZ1 184 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ANKRD30BLA7E2S9 258 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IDSB3KWA1 339 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 E9PBE3 544 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 XKRYO14609 159 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 MSH4O15457 936 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC7A4O43246 635 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PRKYO43930 277 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 FMO6PO60774 539 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ENTPD5O75356 428 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CXCL14O95715 111 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 MOSP00540 346 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CXCL10P02778 98 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IL4P05112 153 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KLK3P07288 261 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 TDGF1P13385 188 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PGAM1P18669 254 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 XRCC1P18887 633 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CD34P28906 385 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 OTX2P32243 289 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CD80P33681 288 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 SHMT2P34897 504 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 HSPA1LP34931 641 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 MAGEA5P43359 124 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KIR2DS4P43632 304 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 VDAC2P45880 294 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KLK7P49862 253 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PRKXP51817 358 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 TDGF1P3P51864 188 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 EFNB2P52799 333 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 RAP1BP61224 184 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CACNG7P62955 275 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 RAB40BQ12829 278 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PDIA5Q14554 519 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PRPSAP1Q14558 356 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 SF3A2Q15428 464 aaKnown RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 STK11Q15831 433 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 TRIM16LQ309B1 348 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KRTAP13-2Q52LG2 175 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PARP10Q53GL7 1025 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KLF17Q5JT82 389 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ACSM5Q6NUN0 579 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM199XQ6PEV8 388 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 Q6ZN92 141 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PAQR7Q86WK9 346 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KRTAP13-1Q8IUC0 172 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 MFSD6LQ8IWD5 586 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 PGAM4Q8N0Y7 254 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 DHRSXQ8N5I4 330 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM86B1Q8N7N1 296 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 Q8N976 141 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 OR52P1PQ8NH57 321 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 HTR3CQ8WXA8 447 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 RGP1Q92546 391 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ARPC1AQ92747 370 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 SNX21Q969T3 373 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 FCRL1Q96LA6 429 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 RUFY1Q96T51 708 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CCT7Q99832 543 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 KLHDC3Q9BQ90 382 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 RANBP3Q9H6Z4 567 aaPredicted RBP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 FOLH1BQ9HBA9 442 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ZFP14Q9HCL3 533 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 MID1IP1Q9NPA3 183 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 IL26Q9NPH9 171 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 ANO10Q9NW15 660 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 AATFQ9NY61 560 aaKnown RBP eCLIP0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 TRAPPC4Q9Y296 219 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 USP16Q9Y5T5 823 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 TMEM14AQ9Y6G1 99 aa0.64□□□□□ -2.31
SNORD28B-201ENST00000390993 CARMIL1Q5VZK9 1371 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 FAM230AA0A1W2PPH8 454 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 A0A1W2PRQ8 180 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 GSAPA4D1B5 854 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PRSS37A4D1T9 235 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 CCDC182A6NF36 153 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 C12orf71A8MTZ7 269 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 H3BNH8 94 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 RPL36A-HNRNPH2H7BZ11 118 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 PEX7O00628 323 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 STX7O15400 261 aaKnown RBP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SLC31A2O15432 143 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 RBFOX2O43251 390 aaKnown RBP eCLIP0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 UGT1A9O60656 530 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 SUPT3HO75486 399 aa0.63□□□□□ -2.31
SNORD28B-201ENST00000390993 TOM1L1O75674 476 aa0.63□□□□□ -2.31
Retrieved 100 of 20,778 RNA–protein pairs in 79.9 ms