RNA–Protein interactions for RNA: ENST00000390466.1

TRAV39-201, Transcript of T cell receptor alpha variable 39, humanhuman

APPRIS P1 BASIC

Gene TRAV39, Length 331 nt, Biotype TR V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV39-201ENST00000390466 TMEM218A2RU14 115 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 OR6C68A6NDL8 312 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 OR6C76A6NM76 312 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 IFITM5A6NNB3 132 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 COLCA2A8K830 154 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 EFCAB7A8K855 629 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 HNRNPCL2B2RXH8 293 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 HNRNPCL3B7ZW38 293 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 WASH3PC4AMC7 463 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 C5orf58C9J3I9 102 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 F5H5P2 479 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 H7C417 338 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SCAMP1O15126 338 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PPM1DO15297 605 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FLRT2O43155 660 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 BCL2L11O43521 198 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GATCO43716 136 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 OR2T1O43869 369 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 DOK2O60496 412 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CREBL2O60519 120 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 TBL1XO60907 577 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LDB3O75112 727 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ICOSLGO75144 302 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ADAMTS4O75173 837 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 NDUFS6O75380 124 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SLC25A12O75746 678 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 AKR7A3O95154 331 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CATP04040 527 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CRYBA1P05813 215 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 HOXC4P09017 264 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF735P0CB33 412 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FAM157CP0CG43 387 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 HNRNPCL4P0DMR1 293 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 TMIGD3P0DMS9 266 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CLUP10909 449 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PRF1P14222 555 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MUC1P15941 1255 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ABOP16442 354 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 HLA-GP17693 338 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 NDUFV2P19404 249 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MAKP20794 623 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CNR1P21554 472 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PTAFRP25105 342 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LMO1P25800 156 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 BDKRB2P30411 391 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PRKAR1BP31321 381 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CD70P32970 193 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 RORAP35398 523 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PTGFRP43088 359 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GCGRP47871 477 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 KCNJ3P48549 501 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 KHKP50053 298 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GDI2P50395 445 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GATMP50440 423 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GPR143P51810 404 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 TAS2R20P59543 309 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PSMA6P60900 246 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 EEF1A1P68104 462 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CXADRP78310 365 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MRPS10P82664 201 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PITPNAQ00169 270 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MEF2AQ02078 507 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SLC3A1Q07837 685 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FOXD4Q12950 439 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MAP2K5Q13163 448 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SNTB1Q13884 538 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CCDC85BQ15834 202 aaPredicted RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ZIC1Q15915 447 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CTXN3Q4LDR2 81 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 RTP2Q5QGT7 225 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MANEAQ5SRI9 462 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PIP5KL1Q5T9C9 394 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 PRPF38BQ5VTL8 546 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 KHDRBS2Q5VWX1 349 aaKnown RBP3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LIPNQ5VXI9 398 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 DMRTA1Q5VZB9 504 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 C18orf63Q68DL7 685 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ASPHD2Q6ICH7 369 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FAM166AQ6J272 317 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SLC25A25Q6KCM7 469 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 CDC73Q6P1J9 531 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FUT10Q6P4F1 479 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 TMEM88Q6PEY1 159 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LCTLQ6UWM7 567 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 APOOLQ6UXV4 268 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF793Q6ZN11 406 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 ZNF836Q6ZNA1 936 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 FRRS1Q6ZNA5 592 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MBOAT2Q6ZWT7 520 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 USP53Q70EK8 1073 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LINGO2Q7L985 606 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 TAS1R1Q7RTX1 841 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 LRRTM1Q86UE6 522 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 VRK2Q86Y07 508 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 MISPQ8IVT2 679 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SERPINA12Q8IW75 414 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 NRMQ8IXM6 262 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 GJD3Q8N144 294 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 KRT78Q8N1N4 520 aa3.17□□□□□ -1.9
TRAV39-201ENST00000390466 SYS1Q8N2H4 156 aa3.17□□□□□ -1.9
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms