RNA–Protein interactions for RNA: ENST00000390462.1

TRAV35-201, Transcript of T cell receptor alpha variable 35, humanhuman

BASIC

Gene TRAV35, Length 330 nt, Biotype TR V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV35-201ENST00000390462 RGS1Q08116 209 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 SRSF9Q13242 221 aaKnown RBP eCLIP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 RIGQ13278 110 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 SNTA1Q13424 505 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 MAPRE2Q15555 327 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 CALCRLQ16602 461 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 SLC5A12Q1EHB4 618 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 MS4A18Q3C1V0 323 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 XKR6Q5GH73 641 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 DMRTC1Q5HYR2 192 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 EOGTQ5NDL2 527 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 LY6G6FQ5SQ64 297 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 C9orf135Q5VTT2 229 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 NADSYN1Q6IA69 706 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 C22orf42Q6IC83 251 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 ULK3Q6PHR2 472 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 ATRAIDQ6UW56 229 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 ARCQ7LC44 396 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 SLC16A14Q7RTX9 510 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 HSD11B1LQ7Z5J1 315 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 KMT5CQ86Y97 462 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 ARHGAP18Q8N392 663 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 KBTBD3Q8NAB2 608 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 FBXO25Q8TCJ0 367 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 CD101Q93033 1021 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 SDSLQ96GA7 329 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 PLEKHA8Q96JA3 519 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 JSRP1Q96MG2 331 aaPredicted RBP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 TOX2Q96NM4 488 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 CSPG4P5Q96PW8 444 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 CNN2Q99439 309 aaKnown RBP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 LPAR4Q99677 370 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 PELOQ9BRX2 385 aaKnown RBP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 RACGAP1Q9H0H5 632 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 KLK15Q9H2R5 256 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 MS4A12Q9NXJ0 267 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 NKIRAS1Q9NYS0 192 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 ZNF224Q9NZL3 707 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 RCOR3Q9P2K3 495 aaPredicted RBP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 MYO6Q9UM54 1294 aa5.58□□□□□ -1.52
TRAV35-201ENST00000390462 EXOSC1Q9Y3B2 195 aaKnown RBP5.58□□□□□ -1.52
TRAV35-201ENST00000390462 NEDD4P46934 1319 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 PCDH11XQ9BZA7 1347 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 C1orf232A0A0U1RR37 186 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 IQANK1A0A1B0GTG1 560 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 A0A1W2PPI3 338 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CYB561D2O14569 222 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ZNF195O14628 629 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 RAB29O14966 203 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 PAX4O43316 350 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 RGS14O43566 566 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SPRY3O43610 288 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CDK2AP2O75956 126 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ATP5LO75964 103 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ANGPTL1O95841 491 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 NR3C1P04150 777 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 HBQ1P09105 142 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 BCKDHBP21953 392 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 DCKP27707 260 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 GCAP28676 217 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CD40LGP29965 261 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CFHR2P36980 270 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 HERV-K104P61576 105 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 RPL24P83731 157 aaKnown RBP5.57□□□□□ -1.52
TRAV35-201ENST00000390462 GPS2Q13227 327 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ART3Q13508 389 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 VGLL4Q14135 290 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 KIR2DS3Q14952 304 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CYTH1Q15438 398 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 DEFB115Q30KQ5 88 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SPATS1Q496A3 300 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 FAM106AQ4KMX7 169 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 RFTN2Q52LD8 501 aaPredicted RBP5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CYBRD1Q53TN4 286 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SPANXN4Q5MJ08 99 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 STUMQ69YW2 141 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SHC4Q6S5L8 630 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 LRRC31Q6UY01 552 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 HDDC2Q7Z4H3 204 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ICA1LQ8NDH6 482 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 GPR151Q8TDV0 419 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 FCAMRQ8WWV6 532 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 TADA1Q96BN2 335 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SLC47A1Q96FL8 570 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 NIPSNAP3BQ9BS92 247 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 CSTL1Q9H114 145 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 LRRC19Q9H756 370 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 NANSQ9NR45 359 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 GPATCH2LQ9NWQ4 482 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 EMC3Q9P0I2 261 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ST6GALNAC2Q9UJ37 374 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 ING1Q9UK53 422 aaPredicted RBP5.57□□□□□ -1.52
TRAV35-201ENST00000390462 DHRS7Q9Y394 339 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 AK6Q9Y3D8 172 aaKnown RBP5.57□□□□□ -1.52
TRAV35-201ENST00000390462 TESMINQ9Y4I5 508 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 PCDHGB1Q9Y5G3 927 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 MMP24Q9Y5R2 645 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 SCN11AQ9UI33 1791 aa5.57□□□□□ -1.52
TRAV35-201ENST00000390462 A0A0A6YYD4 124 aa5.56□□□□□ -1.52
TRAV35-201ENST00000390462 ARHGEF33A8MVX0 844 aa5.56□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms