RNA–Protein interactions for RNA: ENST00000389629.8

RTF1-201, Transcript of RTF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RTF1, Length 5,021 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTF1-201ENST00000389629 RADILQ96JH8 1075 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 AMDHD1Q96NU7 426 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 ZNF736B4DX44 427 aaPredicted RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 ZNF254O75437 659 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 CXADRP78310 365 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 FLI1Q01543 452 aaPredicted RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 PUS10Q3MIT2 529 aaKnown RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 YOD1Q5VVQ6 348 aaPredicted RBP13.26□□□□□ -0.29
RTF1-201ENST00000389629 FN3KQ9H479 309 aa13.26□□□□□ -0.29
RTF1-201ENST00000389629 SLC5A10A0PJK1 596 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 NPC1O15118 1278 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 CXCL3P19876 107 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 HIST1H1TP22492 207 aaPredicted RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 TEAD1P28347 426 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MRPS10P82664 201 aaKnown RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 SLC25A35Q3KQZ1 300 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 GAREM2Q75VX8 874 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 OR4C15Q8NGM1 316 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 LYSMD1Q96S90 227 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 PHB2Q99623 299 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SEMA4GQ9NTN9 838 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 CCL26Q9Y258 94 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 NDUFB2O95178 105 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 LDOC1O95751 146 aaPredicted RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 SYN1P17600 705 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 HCCSP53701 268 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SIRPAP78324 504 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 IL13RA1P78552 427 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 PAN3Q58A45 887 aaKnown RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 C9orf62Q8N4C0 152 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 OR5T2Q8NGG2 359 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ORAI1Q96D31 301 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 PLA2G12AQ9BZM1 189 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MS4A7Q9GZW8 240 aaPredicted RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 LIN7BQ9HAP6 207 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 Q9N2J8 555 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 B3GAT2Q9NPZ5 323 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MAN2C1Q9NTJ4 1040 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SIDT1Q9NXL6 827 aaKnown RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 MYO7AQ13402 2215 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ANKRD61A6NGH8 418 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 DPM1O60762 260 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 PEA15Q15121 130 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ZNF529Q6P280 563 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 CNKSR3Q6P9H4 555 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 NECAB3Q96P71 396 aaPredicted RBP13.25□□□□□ -0.29
RTF1-201ENST00000389629 ZNF649Q9BS31 505 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MED18Q9BUE0 208 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 REV1Q9UBZ9 1251 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 THSD7AQ9UPZ6 1657 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SGK494L7N484 410 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 S1PR1P21453 382 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SOX9P48436 509 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ILF3Q12906 894 aaKnown RBP eCLIP13.25□□□□□ -0.29
RTF1-201ENST00000389629 IRF3Q14653 427 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 RHEBQ15382 184 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ABCA11PQ4W5N1 156 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 C2orf27AQ580R0 203 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 FBXL6Q8N531 539 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 LINC00052Q96N35 136 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MS4A4EQ96PG1 132 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 ZNF559Q9BR84 538 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SLC35A3Q9Y2D2 325 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 SRCAPQ6ZRS2 3230 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 MYO9BQ13459 2157 aa13.25□□□□□ -0.29
RTF1-201ENST00000389629 A0A0B4J2A0 478 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 CLEC3AO75596 197 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 CBX5P45973 191 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 ST3GAL2Q16842 350 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 TMEM81Q6P7N7 255 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 NDUFAF7Q7L592 441 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 DNAAF1Q8NEP3 725 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 OR10R2Q8NGX6 335 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 NEK7Q8TDX7 302 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 SLC38A3Q99624 504 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 MICU1Q9BPX6 476 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 SEMA4CQ9C0C4 833 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 NRIP3Q9NQ35 241 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 SHPKQ9UHJ6 478 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 ZNF443Q9Y2A4 671 aaPredicted RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 ZNF593O00488 134 aaPredicted RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 AIFM1O95831 613 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 IGHA2P01877 340 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 OR8G3PP0DMU2 310 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 ADH6P28332 368 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 CHAF1BQ13112 559 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 AVPI1Q5T686 147 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 H3F3CQ6NXT2 135 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 CDK2AP1O14519 115 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 RD3LP0DJH9 198 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 TPT1P13693 172 aaKnown RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 RBMXP38159 391 aaKnown RBP13.24□□□□□ -0.29
RTF1-201ENST00000389629 SLC7A9P82251 487 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 PDE7AQ13946 482 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 LTB4RQ15722 352 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 FAM26DQ5JW98 314 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 RNF165Q6ZSG1 346 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 CMIPQ8IY22 773 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 OR7G2Q8NG99 324 aa13.24□□□□□ -0.29
RTF1-201ENST00000389629 TRMT61AQ96FX7 289 aaKnown RBP13.24□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 51.1 ms