RNA–Protein interactions for RNA: ENST00000389386.7

VPS9D1-201, Transcript of VPS9 domain containing 1, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene VPS9D1, Length 2,748 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS9D1-201ENST00000389386 FAM199XQ6PEV8 388 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 CMTM8Q8IZV2 173 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF565Q8N9K5 539 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 STK35Q8TDR2 534 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC38A1Q9H2H9 487 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 HCFC1R1Q9NWW0 138 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SPG21Q9NZD8 308 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MBD2Q9UBB5 411 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MKL2Q9ULH7 1088 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 AK6Q9Y3D8 172 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 OR10H1Q9Y4A9 318 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 NPIPB15A6NHN6 443 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 RFPL4AA6NLU0 287 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 RFPL4AL1F8VTS6 287 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 TGM5O43548 720 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC16A8O95907 504 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 HEXAP06865 529 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 STXBP1P61764 594 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 HABP2Q14520 560 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 HES5Q5TA89 166 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC6A19Q695T7 634 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 FCRLBQ6BAA4 426 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 TSSK4Q6SA08 328 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 CRTC1Q6UUV9 634 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 NUDT18Q6ZVK8 323 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MEPCEQ7L2J0 689 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 ADCK2Q7Z695 626 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 OR1S2Q8NGQ3 325 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 TRMT2BQ96GJ1 504 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MED20Q9H944 212 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SIRT3Q9NTG7 399 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PCDHB10Q9UN67 800 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 CCL26Q9Y258 94 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 CARHSP1Q9Y2V2 147 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 LTBP2Q14767 1821 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 NR2F1P10589 423 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 ATP1B2P14415 290 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MYOGP15173 224 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 IMPA1P29218 277 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PTH2RP49190 550 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PNLIPRP1P54315 467 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 LMAN2Q12907 356 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PDZK1IP1Q13113 114 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 RBMS2Q15434 407 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 TMEM240Q5SV17 173 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 NIPAL3Q6P499 406 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 GID4Q8IVV7 300 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 SKA3Q8IX90 412 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 CFAP206Q8IYR0 622 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MUC20Q8N307 709 aaPredicted RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PIGXQ8TBF5 258 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PHOSPHO1Q8TCT1 267 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 XAGE5Q8WWM1 108 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PEX11GQ96HA9 241 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 PAPOLGQ9BWT3 736 aaKnown RBP13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 MFRPQ9BY79 579 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 P2RX2Q9UBL9 471 aa13.55□□□□□ -0.24
VPS9D1-201ENST00000389386 TRAV14DV4A0A0A6YYC5 116 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TMEM272A0A1B0GTI8 110 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 C5orf52A6NGY3 159 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 J3QLW9 94 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 POP7O75817 140 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 PAK4O96013 591 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF19P17023 458 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 FPR3P25089 353 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 BDKRB2P30411 391 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 BUD31P41223 144 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 NPBWR1P48145 328 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TAS2R41P59536 307 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TAS2R43P59537 309 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SLBPQ14493 270 aaKnown RBP eCLIP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TRAM2Q15035 370 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 FAM122BQ7Z309 247 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF546Q86UE3 836 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 LRRTM4Q86VH4 590 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SMPDL3AQ92484 453 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC25A38Q96DW6 304 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TAS2R10Q9NYW0 307 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF629Q9UEG4 869 aaPredicted RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 MOKQ9UQ07 419 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TRANK1O15050 2925 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 A0A0D9SG52 128 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 GRXCR1A8MXD5 290 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 UBE2CO00762 179 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 CCL16O15467 120 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SLC25A12O75746 678 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SLCO2B1O94956 709 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 CBR1P16152 277 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 HSPB3Q12988 150 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 PIP5KL1Q5T9C9 394 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 ZNF620Q6ZNG0 422 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TCEAL8Q8IYN2 117 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 OR2T33Q8NG76 320 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 C4orf36Q96KX1 117 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 QRSL1Q9H0R6 528 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 TLNRD1Q9H1K6 362 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SEMA4GQ9NTN9 838 aa13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 DHCR7Q9UBM7 475 aaKnown RBP13.54□□□□□ -0.24
VPS9D1-201ENST00000389386 SH2B3Q9UQQ2 575 aa13.54□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms