RNA–Protein interactions for RNA: ENST00000380829.5

CLCN4-201, Transcript of chloride voltage-gated channel 4, humanhuman

TSL 5 BASIC

Gene CLCN4, Length 2,418 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN4-201ENST00000380829 CT45A2Q5DJT8 189 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 LCN1P1Q5VSP4 162 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 TMEM81Q6P7N7 255 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 HSDL2Q6YN16 418 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 SLC37A3Q8NCC5 494 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 TMEM239Q8WW34 195 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 AKAP1Q92667 903 aaKnown RBP eCLIP13.12□□□□□ -0.31
CLCN4-201ENST00000380829 SLC38A2Q96QD8 506 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 MCCC2Q9HCC0 563 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 ZC4H2Q9NQZ6 224 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 POLE3Q9NRF9 147 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 IL20Q9NYY1 176 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 NLGN3Q9NZ94 848 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 SLC35F4A4IF30 521 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 H3BMH7 237 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 TOR1AO14656 332 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 CSO75390 466 aaKnown RBP13.12□□□□□ -0.31
CLCN4-201ENST00000380829 LYPD3O95274 346 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 FOLR1P15328 257 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 GLB1P16278 677 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 NCF4Q15080 339 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 OR1L3Q8NH93 324 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 OSTF1Q92882 214 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 SAMD8Q96LT4 415 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 LMF1Q96S06 567 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 CHRNA10Q9GZZ6 450 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 Q9N2J8 555 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 PNO1Q9NRX1 252 aaKnown RBP13.12□□□□□ -0.31
CLCN4-201ENST00000380829 TESQ9UGI8 421 aaKnown RBP13.12□□□□□ -0.31
CLCN4-201ENST00000380829 OR10H1Q9Y4A9 318 aa13.12□□□□□ -0.31
CLCN4-201ENST00000380829 FAM240BA0A1B0GVZ2 78 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 C17orf105B2RV13 164 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 RFPL3O75679 317 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 PPM1BO75688 479 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 MAKP20794 623 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 DRD5P21918 477 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 DHPSP49366 369 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 FUT7Q11130 342 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 SHBQ15464 509 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 MINDY4Q4G0A6 757 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 SLC25A30Q5SVS4 291 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 MAMSTRQ6ZN01 415 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 MRGPREQ86SM8 312 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 PLXDC1Q8IUK5 500 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF321PQ8N8H1 164 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 OR52I1Q8NGK6 324 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ST8SIA2Q92186 375 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 TSLPQ969D9 159 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 HYLS1Q96M11 299 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 GPR137Q96N19 417 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CDCP1Q9H5V8 836 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 B3GAT2Q9NPZ5 323 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 LANCL2Q9NS86 450 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 FLRT3Q9NZU0 649 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF223Q9UK11 482 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 LSM2Q9Y333 95 aaKnown RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 RP1P56715 2156 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 DMDP11532 3685 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ARID1BQ8NFD5 2236 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 SLC2A10O95528 541 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CLPSP04118 112 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CRYBB2P43320 205 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 P2RY14Q15391 338 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 NDUFAF6Q330K2 333 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CFAP77Q6ZQR2 320 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 SHFQ7M4L6 423 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF615Q8N8J6 731 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 PMM1Q92871 262 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 NUDT22Q9BRQ3 303 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 KRCC1Q9NPI7 259 aaPredicted RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 FSCN3Q9NQT6 498 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 DNAJB12Q9NXW2 375 aaKnown RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 ZMAT5Q9UDW3 170 aaKnown RBP13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CBLCQ9ULV8 474 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 MGAT4AQ9UM21 535 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 CDH10Q9Y6N8 788 aa13.11□□□□□ -0.31
CLCN4-201ENST00000380829 IQCMA0A1B0GVH7 501 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 RPS10-NUDT3A0A1W2PQS6 291 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF670-ZNF695F2Z2N8 137 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 NUPL2O15504 423 aaKnown RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 PRODHO43272 600 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 LRRTM2O43300 516 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 FMO6PO60774 539 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 TRIM3O75382 744 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 PDGFBP01127 241 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ZGLP1P0C6A0 271 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SLC2A2P11168 524 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 GCGRP47871 477 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 MAP2K6P52564 334 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 CAV3P56539 151 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 FGFBP1Q14512 234 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 PGGHGQ32M88 737 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 SHEQ5VZ18 495 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 TRIQKQ629K1 86 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 BCORP1Q8N888 145 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 GDPD1Q8N9F7 314 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ZNF431Q8TF32 576 aaPredicted RBP13.1□□□□□ -0.31
CLCN4-201ENST00000380829 TMEM203Q969S6 136 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 RNFT2Q96EX2 444 aa13.1□□□□□ -0.31
CLCN4-201ENST00000380829 ELF4Q99607 663 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 25.8 ms