RNA–Protein interactions for RNA: ENST00000380747.5

HMGN1-202, Transcript of high mobility group nucleosome binding domain 1, humanhuman

TSL 3 BASIC

Gene HMGN1, Length 709 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1-202ENST00000380747 MEX3BQ6ZN04 569 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 CDH24Q86UP0 819 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 PTOV1Q86YD1 416 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ZZZ3Q8IYH5 903 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ACBD4Q8NC06 268 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 OR10A6Q8NH74 314 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 RP9Q8TA86 221 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ROBO4Q8WZ75 1007 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 LRRC46Q96FV0 321 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 REXO5Q96IC2 774 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ZNF607Q96SK3 696 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 SPOCK3Q9BQ16 436 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ECSITQ9BQ95 431 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 CCDC106Q9BWC9 280 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 C12orf49Q9H741 205 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 KAT8Q9H7Z6 458 aaKnown RBP8.27□□□□□ -1.09
HMGN1-202ENST00000380747 TIGARQ9NQ88 270 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 CHRNA9Q9UGM1 479 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 SLC13A4Q9UKG4 626 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 ITGB1BP2Q9UKP3 347 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 CLEC4AQ9UMR7 237 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 TMED7Q9Y3B3 224 aa8.27□□□□□ -1.09
HMGN1-202ENST00000380747 NCOA6Q14686 2063 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 PRORSD1PA6NEY8 169 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 FXYD1O00168 92 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 FAAHO00519 579 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SERPINB7O75635 380 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 TNFSF13O75888 250 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 NPPAP01160 153 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 CRHP06850 196 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 PRG2P13727 222 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 PCGF2P35227 344 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SLC1A3P43003 542 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 HTR3AP46098 478 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 CTBP2P56545 445 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 HOXC5Q00444 222 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SYT14P1Q58G82 188 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 EEF1A1P5Q5VTE0 462 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 VWA1Q6PCB0 445 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 DHRS4L2Q6PKH6 230 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 NET1Q7Z628 596 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 LUZP2Q86TE4 346 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SERPINA11Q86U17 422 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 LSRQ86X29 649 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 ADGRG3Q86Y34 549 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 ARMC8Q8IUR7 673 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SLC30A8Q8IWU4 369 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 OR8J3Q8NGG0 315 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SLC25A43Q8WUT9 341 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 RNASE6Q93091 150 aaKnown RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 CPNE4Q96A23 557 aaPredicted RBP8.26□□□□□ -1.09
HMGN1-202ENST00000380747 DNAJA3Q96EY1 480 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 SRXN1Q9BYN0 137 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 PIGMQ9H3S5 423 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 COQ10BQ9H8M1 238 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 RNF122Q9H9V4 155 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 KLHL28Q9NXS3 571 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 OSGIN1Q9UJX0 560 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 PACSIN3Q9UKS6 424 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 CHST2Q9Y4C5 530 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 KIAA1549Q9HCM3 1950 aa8.26□□□□□ -1.09
HMGN1-202ENST00000380747 ACANP16112 2415 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 PHF3Q92576 2039 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 CACNA1CQ13936 2221 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 IGHV3-15A0A0B4J1V0 119 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 TMEM72A0PK05 275 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 M0QX08 132 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 TPST1O60507 370 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 OPN1SWP03999 348 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 FESP07332 822 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 ENPP1P22413 925 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 CXCR1P25024 350 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 ACAA2P42765 397 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 KIR2DL2P43627 348 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 GZMMP51124 257 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 DLX5P56178 289 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 RGS8P57771 180 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 OR2B6P58173 313 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 SNTB1Q13884 538 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 ZNF239Q16600 458 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 VMACQ2NL98 169 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 GLIPR1L2Q4G1C9 344 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 INTS11Q5TA45 600 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 GTF2IRD2BQ6EKJ0 949 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 WBP2NLQ6ICG8 309 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 TMPPEQ6ZT21 453 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 PATL1Q86TB9 770 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 GTF2IRD2Q86UP8 949 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 SMYD1Q8NB12 490 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 SLC26A7Q8TE54 656 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 DDIT4LQ96D03 193 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 CMTM5Q96DZ9 223 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 RBM24Q9BX46 236 aaKnown RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 OR11A1Q9GZK7 315 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 ENKD1Q9H0I2 346 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 MYLK2Q9H1R3 596 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 OPN3Q9H1Y3 402 aaPredicted RBP8.25□□□□□ -1.09
HMGN1-202ENST00000380747 EFCAB1Q9HAE3 211 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 MCCC2Q9HCC0 563 aa8.25□□□□□ -1.09
HMGN1-202ENST00000380747 RPS6KB2Q9UBS0 482 aa8.25□□□□□ -1.09
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms