RNA–Protein interactions for RNA: ENST00000380176.7

PDLIM5-204, Transcript of PDZ and LIM domain 5, humanhuman

TSL 1 (best)

Gene PDLIM5, Length 3,098 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-204ENST00000380176 ADGRL4Q9HBW9 690 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 INIPQ9NRY2 104 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ST6GALNAC1Q9NSC7 600 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 COMMD3Q9UBI1 195 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 FBXL21Q9UKT6 434 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC35A3Q9Y2D2 325 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR10H1Q9Y4A9 318 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ALPK2Q86TB3 2170 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 A0A1W2PQ09 198 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 DAPL1A0PJW8 107 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 MCIDASD6RGH6 385 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SNPHO15079 494 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 MAGEB4O15481 346 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OIP5O43482 229 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RNF13O43567 381 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 HLA-DPB1P04440 258 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RFX2P48378 723 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TPTEP56180 551 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 E2F1Q01094 437 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 MRPL28Q13084 256 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TAB1Q15750 504 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM27D1Q5T7N8 215 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PTCRAQ6ISU1 281 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RPL13AP3Q6NVV1 102 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ULK3Q6PHR2 472 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 RPTNQ6XPR3 784 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 TTLL10Q6ZVT0 673 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 GHDCQ8N2G8 530 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SDR9C7Q8NEX9 313 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR51L1Q8NGJ5 315 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 OR4K13Q8NH42 304 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PTPMT1Q8WUK0 201 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNRF4Q8WWF5 429 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 SENP5Q96HI0 755 aaPredicted RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 HSPA12BQ96MM6 686 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 CCDC86Q9H6F5 360 aaKnown RBP7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 PDE7BQ9NP56 450 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 BABAM2Q9NXR7 383 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 ADAM18Q9Y3Q7 739 aa7.31□□□□□ -1.24
PDLIM5-204ENST00000380176 WDR87Q6ZQQ6 2873 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 FABP12A6NFH5 140 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 TLCD2A6NGC4 264 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SERINC4A6NH21 518 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RIIAD1A6NNX1 92 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 C17orf105B2RV13 164 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 H3BMH7 237 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF749O43361 778 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 HPGDSO60760 199 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SBK2P0C263 348 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 PEPDP12955 493 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 HIST1H1CP16403 213 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ALAS2P22557 587 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 HSD17B7P56937 341 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 OR1D5P58170 312 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 DEFA1P59665 94 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 DEFA3P59666 94 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF85Q03923 595 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 GALEQ14376 348 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 CD226Q15762 336 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 COL13A1Q5TAT6 717 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 DDI2Q5TDH0 399 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 APOOLQ6UXV4 268 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RTL4Q6ZR62 310 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 MED25Q71SY5 747 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 IL17RDQ8NFM7 739 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 OR52E2Q8NGJ4 325 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 TSLPQ969D9 159 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ERMAPQ96PL5 475 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ATF6BQ99941 703 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 G6PC3Q9BUM1 346 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RNF32Q9H0A6 362 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 UCK1Q9HA47 277 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 PNO1Q9NRX1 252 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 LANCL2Q9NS86 450 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 DHCR7Q9UBM7 475 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RNF215Q9Y6U7 377 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 MN1Q10571 1320 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SLC22A31A6NKX4 558 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 LMO7DNF2Z398 122 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 GTPBP1O00178 669 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 GUSBP08236 651 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 CSF3P09919 207 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 HK1P19367 917 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RBM34P42696 430 aaKnown RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 OR12D2P58182 307 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SKP1P63208 163 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 CFHR1Q03591 330 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SNAP47Q5SQN1 464 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 CBLN3Q6UW01 205 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 C6orf15Q6UXA7 325 aaPredicted RBP7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ZNF550Q7Z398 422 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 FAM181AQ8N9Y4 354 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 C17orf47Q8NEP4 570 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 OR5W2Q8NH69 310 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 SMPDL3BQ92485 455 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 UQCC2Q9BRT2 126 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 ASB6Q9NWX5 421 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 RPS6KB2Q9UBS0 482 aa7.3□□□□□ -1.24
PDLIM5-204ENST00000380176 MALT1Q9UDY8 824 aa7.3□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 26 ms