RNA–Protein interactions for RNA: ENST00000379016.7

HIPK3-202, Transcript of homeodomain interacting protein kinase 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HIPK3, Length 7,345 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIPK3-202ENST00000379016 NIPSNAP3BQ9BS92 247 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 PARP12Q9H0J9 701 aaKnown RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 FAM212BQ9NTI7 297 aaPredicted RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 IER3IP1Q9Y5U9 82 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 DISP1Q96F81 1524 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 MEGF11A6BM72 1044 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 H0YIV9 168 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 PHF1O43189 567 aaPredicted RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 HPGDSO60760 199 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 RFC3P40938 356 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 CITED2Q99967 270 aaPredicted RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 CCM2LQ9NUG4 571 aaPredicted RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 DTLQ9NZJ0 730 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 NOSIPQ9Y314 301 aaKnown RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 CSNK1G3Q9Y6M4 447 aa12.46□□□□□ -0.41
HIPK3-202ENST00000379016 ASCC3Q8N3C0 2202 aaKnown RBP12.46□□□□□ -0.41
HIPK3-202ENST00000379016 QRICH2Q9H0J4 1663 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 CD163L1Q9NR16 1453 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NFYAP23511 347 aaPredicted RBP12.46□□□□□ -0.42
HIPK3-202ENST00000379016 IMPA1P29218 277 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 MNX1P50219 401 aaPredicted RBP12.46□□□□□ -0.42
HIPK3-202ENST00000379016 EMP2P54851 167 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 ZNF805Q5CZA5 627 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 IER5LQ5T953 404 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 TFAP2CQ92754 450 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 ULBP3Q9BZM4 244 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NIPAL2Q9H841 368 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 PIAS3Q9Y6X2 628 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 TNS2Q63HR2 1409 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NSG1A0A0A6YYJ2 146 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 GYPBP06028 91 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 HTRA3P83110 453 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NRMQ8IXM6 262 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 OR10R2Q8NGX6 335 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 GPR148Q8TDV2 347 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 ULBP2Q9BZM5 246 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 C1orf123Q9NWV4 160 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 B4GALT6Q9UBX8 382 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NKX1-2Q9UD57 310 aaPredicted RBP12.46□□□□□ -0.42
HIPK3-202ENST00000379016 UBIAD1Q9Y5Z9 338 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 MED14O60244 1454 aa12.46□□□□□ -0.42
HIPK3-202ENST00000379016 NCOA3Q9Y6Q9 1424 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 XKRY2A2RUG3 117 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 GPR39O43194 453 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 UBL4AP11441 157 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 GPR85P60893 370 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 DBPQ10586 325 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 OR10K2Q6IF99 312 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 OR8B4Q96RC9 309 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 B3GAT1Q9P2W7 334 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ZNF835Q9Y2P0 537 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ATP23Q9Y6H3 246 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 GLI2P10070 1586 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ALKQ9UM73 1620 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 SPINT2O43291 252 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 PPP1R3AQ16821 1122 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 BOD1Q96IK1 185 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 FYTTD1Q96QD9 318 aaKnown RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 DPH3P1Q9H4G8 78 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 FAM124BQ9H5Z6 455 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ARPC3O15145 178 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 CSF1P09603 554 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 DTYMKP23919 212 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 RBP2P50120 134 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ZNF280AP59817 542 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 PRPS1P60891 318 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 PCBD1P61457 104 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 MFGE8Q08431 387 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 MEF2DQ14814 521 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 PHLDA2Q53GA4 152 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 FIGLAQ6QHK4 219 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 C17orf107Q6ZR85 190 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 LINC00696Q6ZRV3 163 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 H2BFWTQ7Z2G1 175 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 SCML4Q8N228 414 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 C1orf127Q8N9H9 656 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 GPR32P1Q8NGA4 272 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ZUFSPQ96AP4 578 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 LGALS12Q96DT0 336 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 PRDM15P57071 1507 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 OR5K4A6NMS3 321 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ICMTO60725 284 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 CLVS2Q5SYC1 327 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 CNIH2Q6PI25 160 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 CNTN4Q8IWV2 1026 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ATOH1Q92858 354 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 SLC35E1Q96K37 410 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 LIN7BQ9HAP6 207 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 C5AR2Q9P296 337 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 BOKQ9UMX3 212 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 CBY1Q9Y3M2 126 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 IGHV3-64DA0A0J9YX35 117 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 DNASE2O00115 360 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ABCD4O14678 606 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 SRPX2O60687 465 aaPredicted RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 C1GALT1C1LP0DN25 315 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 HNRNPA3P51991 378 aaKnown RBP12.45□□□□□ -0.42
HIPK3-202ENST00000379016 KRTDAPP60985 99 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 ZNF141Q15928 474 aa12.45□□□□□ -0.42
HIPK3-202ENST00000379016 NDUFAF7Q7L592 441 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 379.2 ms