RNA–Protein interactions for RNA: ENST00000378778.5

PTPRR-203, Transcript of protein tyrosine phosphatase, receptor type R, humanhuman

TSL 1 (best) BASIC

Gene PTPRR, Length 2,632 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRR-203ENST00000378778 ADAMTS15Q8TE58 950 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 MS4A4EQ96PG1 132 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CNN2Q99439 309 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CHIAQ9BZP6 476 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 AUNIPQ9H7T9 357 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ACTR10Q9NZ32 417 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 GPN3Q9UHW5 284 aaPredicted RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 INSL5Q9Y5Q6 135 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TTLL8A6PVC2 850 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 H3BUI4 141 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 H7C417 338 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 IMPA2O14732 288 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ARPC5O15511 151 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 POP7O75817 140 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 RBBP9O75884 186 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 APOC3P02656 99 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 PBLDP30039 288 aaPredicted RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 OR12D2P58182 307 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 EEF1A1P68104 462 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 STX4Q12846 297 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 FAM27D1Q5T7N8 215 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ZCCHC12Q6PEW1 402 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TSSK4Q6SA08 328 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ALKAL2Q6UX46 152 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 Q6ZVU0 165 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SZRD1Q7Z422 152 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 VRK2Q86Y07 508 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TRAPPC5Q8IUR0 188 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC35F3Q8IY50 421 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 KCNRGQ8N5I3 272 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 OR1M1Q8NGA1 313 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 C1orf216Q8TAB5 229 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM255BQ8WV15 326 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 FOXJ1Q92949 421 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC25A38Q96DW6 304 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SIPA1Q96FS4 1042 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC22A12Q96S37 553 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 PRSS27Q9BQR3 290 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF559Q9BR84 538 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 MFFQ9GZY8 342 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF304Q9HCX3 659 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 EXOSC3Q9NQT5 275 aaKnown RBP7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CA10Q9NS85 328 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 MTFP1Q9UDX5 166 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 GPR160Q9UJ42 338 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 CES1P1Q9UKY3 287 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SLC7A7Q9UM01 511 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 SIGLEC7Q9Y286 467 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF281Q9Y2X9 895 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 MED31Q9Y3C7 131 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 IRAK3Q9Y616 596 aa7.58□□□□□ -1.2
PTPRR-203ENST00000378778 LRIT2A6NDA9 550 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ANTXRLA6NF34 631 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 GPR89AB7ZAQ6 455 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 C3orf80F5H4A9 247 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 F8W036 122 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 RTCAO00442 366 aaKnown RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 CDC42EP2O14613 210 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 LEFTY1O75610 366 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 GLSO94925 669 aaPredicted RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 HEXAP06865 529 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 GPR89BP0CG08 455 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 F3P13726 295 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 CD46P15529 392 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 CNR1P21554 472 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 DDX6P26196 483 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 PRMT2P55345 433 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 RPS11P62280 158 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 MC2RQ01718 297 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 AMZ1Q400G9 498 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 C10orf91Q5T1B1 145 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 C9orf64Q5T6V5 341 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 PWWP2BQ6NUJ5 590 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 FRRS1Q6ZNA5 592 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 SPAG16Q8N0X2 631 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 OR4D9Q8NGE8 314 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 OR14A16Q8NHC5 309 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 BCL7CQ8WUZ0 217 aaPredicted RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 PCNPQ8WW12 178 aaKnown RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 AUTS2Q8WXX7 1259 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ST8SIA2Q92186 375 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 IGSF21Q96ID5 467 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ART5Q96L15 291 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 MCCC2Q9HCC0 563 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 MLXQ9UH92 298 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 TAC3Q9UHF0 121 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 FBXL2Q9UKC9 423 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 CLEC4EQ9ULY5 219 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 FLVCR2Q9UPI3 526 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ASF1AQ9Y294 204 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 PLEKHA6Q9Y2H5 1048 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ZNF780BQ9Y6R6 833 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 MDC1Q14676 2089 aaKnown RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 KANTRA0A1W2PQU2 76 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 TMEM200CA6NKL6 621 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 XRCC3O43542 346 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 EIF4E2O60573 245 aaKnown RBP7.57□□□□□ -1.2
PTPRR-203ENST00000378778 ATG12O94817 140 aa7.57□□□□□ -1.2
PTPRR-203ENST00000378778 PCDH8O95206 1070 aa7.57□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 36.9 ms