RNA–Protein interactions for RNA: ENST00000378161.5

NPHP4-202, Transcript of nephrocystin 4, humanhuman

TSL 2

Gene NPHP4, Length 4,370 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP4-202ENST00000378161 ING1Q9UK53 422 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 URGCP-MRPS24S4R325 110 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 KIAA1551Q9HCM1 1747 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SCN7AQ01118 1682 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 K7ERU9 68 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PEX12O00623 359 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 OR8G3PP0DMU2 310 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 MC3RP41968 323 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ILKQ13418 452 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SSX1Q16384 188 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ATP6V1FQ16864 119 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ARSJQ5FYB0 599 aaPredicted RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 LRRC69Q6ZNQ3 347 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 LANCL3Q6ZV70 420 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 S100A7AQ86SG5 101 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 NUDT10Q8NFP7 164 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 OR5L2Q8NGL0 311 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 GEMIN6Q8WXD5 167 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PKP4Q99569 1192 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 FAIM2Q9BWQ8 316 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TLNRD1Q9H1K6 362 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 RDH14Q9HBH5 336 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SLC2A9Q9NRM0 540 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SERINC1Q9NRX5 453 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 GPR173Q9NS66 373 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 DNAJB11Q9UBS4 358 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 UTS2RQ9UKP6 389 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 GAB2Q9UQC2 676 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ECM29Q5VYK3 1845 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TOGARAM1Q9Y4F4 1720 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 GABRPO00591 440 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 CD1DP15813 335 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ITPKAP23677 461 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PTH2RP49190 550 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SLC26A5P58743 744 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 HMGCS1Q01581 520 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 MAPK14Q16539 360 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 SOHLH1Q5JUK2 328 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 COL5A1-AS1Q5SY13 56 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 C16orf70Q9BSU1 422 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 TMPRSS13Q9BYE2 586 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 ZDHHC6Q9H6R6 413 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 B3GAT2Q9NPZ5 323 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 MOKQ9UQ07 419 aa10.99□□□□□ -0.65
NPHP4-202ENST00000378161 DDX60LQ5H9U9 1706 aaKnown RBP10.99□□□□□ -0.65
NPHP4-202ENST00000378161 PAPPAQ13219 1627 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 TRDV1A0A1B0GX56 115 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 IQCF3P0C7M6 154 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CORO1AP31146 461 aaKnown RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ACSM1Q08AH1 577 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SERINC3Q13530 473 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SLC25A24Q6NUK1 477 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SLC24A5Q71RS6 500 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 OR6K2Q8NGY2 324 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 BRIX1Q8TDN6 353 aaKnown RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 PPCDCQ96CD2 204 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 DOHHQ9BU89 302 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SOHLH2Q9NX45 425 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 GRHPRQ9UBQ7 328 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ZFP37Q9Y6Q3 630 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 HSFX4A0A1B0GTS1 333 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 HSFX3A0A1B0GWH4 333 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 GXYLT2A0PJZ3 443 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 EEF1E1-BLOC1S5C9J1V9 151 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 BLOC1S5-TXNDC5H3BN57 136 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 BCL2L11O43521 198 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SLC9A3R2Q15599 337 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF660Q6AZW8 331 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 RGMBQ6NW40 437 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 C16orf54Q6UWD8 224 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 DUSP19Q8WTR2 217 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 TMED6Q8WW62 240 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CCDC74AQ96AQ1 378 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 C11orf84Q9BUA3 381 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ARV1Q9H2C2 271 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 KCNK12Q9HB15 430 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 A0A0U1RQS6 177 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 DAPL1A0PJW8 107 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 RNF212BA8MTL3 300 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 A8MXE2 369 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 EPORP19235 508 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 PRPS1L1P21108 318 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CAMLGP49069 296 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CRISP3P54108 245 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 TMEM41BQ5BJD5 291 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ACOT7LQ6ZUV0 252 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 KLBQ86Z14 1044 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ACVR1CQ8NER5 493 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 CASTOR1Q8WTX7 329 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 AKR1E2Q96JD6 320 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 KCNJ15Q99712 375 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 RTP3Q9BQQ7 232 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 ZNF700Q9H0M5 742 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 DPEP2Q9H4A9 486 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 PLEKHB1Q9UF11 243 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 SLC35A3Q9Y2D2 325 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 FAM96BQ9Y3D0 163 aa10.98□□□□□ -0.65
NPHP4-202ENST00000378161 AHDC1Q5TGY3 1603 aaPredicted RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 DUSP11O75319 330 aaKnown RBP10.98□□□□□ -0.65
NPHP4-202ENST00000378161 AVPR2P30518 371 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms