RNA–Protein interactions for RNA: ENST00000377902.5

GNE-201, Transcript of glucosamine (UDP-N-acetyl)-2-epimerase/N-acetylmannosamine kinase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GNE, Length 2,565 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GNE-201ENST00000377902 OPCMLQ14982 345 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 FAM199XQ6PEV8 388 aaPredicted RBP16.58■□□□□ 0.25
GNE-201ENST00000377902 SEZ6L2Q6UXD5 910 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 KIAA1324Q6UXG2 1013 aaKnown RBP16.58■□□□□ 0.25
GNE-201ENST00000377902 FCRLAQ7L513 359 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 UBE2Q1Q7Z7E8 422 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 RNF113BQ8IZP6 322 aaKnown RBP16.58■□□□□ 0.25
GNE-201ENST00000377902 TEX19Q8NA77 164 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 LINC00052Q96N35 136 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 SFXN2Q96NB2 322 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 FLRT3Q9NZU0 649 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 COPS3Q9UNS2 423 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 RNF215Q9Y6U7 377 aa16.58■□□□□ 0.25
GNE-201ENST00000377902 TBC1D3EA0A087X179 549 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 LRRC72A6NJI9 287 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 KHNYNO15037 678 aaKnown RBP16.58■□□□□ 0.24
GNE-201ENST00000377902 P2RX6O15547 441 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 EDNRAP25101 427 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 SIRPAP78324 504 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 FHL1Q13642 323 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 EIPR1Q53HC9 387 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 AGBL4Q5VU57 503 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 NHLRC1Q6VVB1 395 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 FAM98AQ8NCA5 519 aaKnown RBP16.58■□□□□ 0.24
GNE-201ENST00000377902 SRFBP1Q8NEF9 429 aaKnown RBP16.58■□□□□ 0.24
GNE-201ENST00000377902 CNOT9Q92600 299 aaKnown RBP16.58■□□□□ 0.24
GNE-201ENST00000377902 RIT1Q92963 219 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 WBP1Q96G27 269 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 MCCC2Q9HCC0 563 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 PIPOXQ9P0Z9 390 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 MGAT4CQ9UBM8 478 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 ADAM18Q9Y3Q7 739 aa16.58■□□□□ 0.24
GNE-201ENST00000377902 C1QTNF3-AMACRE9PGA6 284 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 STX11O75558 287 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 PROS1P07225 676 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 UCHL1P09936 223 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ACSM4P0C7M7 580 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 PSMB1P20618 241 aaKnown RBP16.57■□□□□ 0.24
GNE-201ENST00000377902 TAGLNQ01995 201 aaKnown RBP16.57■□□□□ 0.24
GNE-201ENST00000377902 TNFRSF17Q02223 184 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 DYRK1AQ13627 763 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ZNF425Q6IV72 752 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 PRSS41Q7RTY9 318 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 SLC51BQ86UW2 128 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 C12orf76Q8N812 135 aaPredicted RBP16.57■□□□□ 0.24
GNE-201ENST00000377902 SNX33Q8WV41 574 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 SLC25A38Q96DW6 304 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ELMOD3Q96FG2 381 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 HDAC8Q9BY41 377 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 RNF208Q9H0X6 261 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ZCCHC4Q9H5U6 513 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ZNF69Q9UC07 566 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 A0A1W2PP55 124 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 FAM171A2A8MVW0 826 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 OGG1O15527 345 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 GSTZ1O43708 216 aaPredicted RBP16.57■□□□□ 0.24
GNE-201ENST00000377902 SELENOFO60613 162 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 CEACAM5P06731 702 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 THBS1P07996 1170 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 SRMP19623 302 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 CMPK1P30085 196 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 RAG2P55895 527 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 NOGQ13253 232 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 HSD17B12Q53GQ0 312 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 COX18Q8N8Q8 333 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ZPLD1Q8TCW7 415 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 CXorf58Q96LI9 332 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 SARGQ9BW04 601 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 SEMA4CQ9C0C4 833 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 C2orf42Q9NWW7 574 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 POMT2Q9UKY4 750 aa16.57■□□□□ 0.24
GNE-201ENST00000377902 ZNF346Q9UL40 294 aaKnown RBP16.57■□□□□ 0.24
GNE-201ENST00000377902 C4orf47A7E2U8 309 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 FGF19O95750 216 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 ATP1B1P05026 303 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 DBIP07108 87 aaKnown RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 DCTDP32321 178 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 OC90Q02509 493 aaPredicted RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 UBE2NLQ5JXB2 153 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 GPAT4Q86UL3 456 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 TMEM52Q8NDY8 209 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 OR52B4Q8NGK2 314 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 MOSPD2Q8NHP6 518 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 ACTR6Q9GZN1 396 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 NRIP3Q9NQ35 241 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 LYARQ9NX58 379 aaKnown RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 NTMQ9P121 344 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 PCDHGA5Q9Y5G8 931 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 SPEGQ15772 3267 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 SZT2Q5T011 3432 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 H3BSH0 61 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 TRIM77I1YAP6 450 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 KHDRBS3O75525 346 aaKnown RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 ARL6IP5O75915 188 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 MAT2AP31153 395 aaKnown RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 OR5M10Q6IEU7 315 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 PRSS42Q7Z5A4 293 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 MS4A7Q9GZW8 240 aaPredicted RBP16.56■□□□□ 0.24
GNE-201ENST00000377902 TRPV4Q9HBA0 871 aa16.56■□□□□ 0.24
GNE-201ENST00000377902 NPDC1Q9NQX5 325 aaPredicted RBP16.56■□□□□ 0.24
Retrieved 100 of 20,778 RNA–protein pairs in 68.9 ms