RNA–Protein interactions for RNA: ENST00000377349.6

CBWD3-204, Transcript of COBW domain containing 3, humanhuman

TSL 2

Gene CBWD3, Length 1,403 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBWD3-204ENST00000377349 BHLHA15Q7RTS1 189 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 MAVSQ7Z434 540 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 ZNF100Q8IYN0 542 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 GLB1L3Q8NCI6 653 aaPredicted RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 OR9I1Q8NGQ6 314 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 ZHX1-C8orf76Q96EF9 292 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 TRMT61AQ96FX7 289 aaKnown RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 TRNT1Q96Q11 434 aaKnown RBP16.93■□□□□ 0.3
CBWD3-204ENST00000377349 OR11A1Q9GZK7 315 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 CHRNA9Q9UGM1 479 aa16.93■□□□□ 0.3
CBWD3-204ENST00000377349 SHISA9B4DS77 424 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 DNAJA2O60884 412 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 RAMP1O60894 148 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 LYZL6O75951 148 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 IL6P05231 212 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 GNA13Q14344 377 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 GRINAQ7Z429 371 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 DTX2Q86UW9 622 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 UBE2J2Q8N2K1 259 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 FAM71CQ8NEG0 241 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 SLC25A43Q8WUT9 341 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-204ENST00000377349 VPS33AQ96AX1 596 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 AURKBQ96GD4 344 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-204ENST00000377349 TRAF4Q9BUZ4 470 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-204ENST00000377349 SAP130Q9H0E3 1048 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 SLC38A1Q9H2H9 487 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 RMND5AQ9H871 391 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 NGBQ9NPG2 151 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 SLC6A13Q9NSD5 602 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 NPAP1Q9NZP6 1156 aa16.92■□□□□ 0.3
CBWD3-204ENST00000377349 GDF2Q9UK05 429 aaPredicted RBP16.92■□□□□ 0.3
CBWD3-204ENST00000377349 A0A1W2PP18 115 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 CYTIPO60759 359 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 ADAM11O75078 769 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 IGHV3-9P01782 118 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 BCHEP06276 602 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 ETFAP13804 333 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 COX5AP20674 150 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 APOBEC1P41238 236 aaKnown RBP16.91■□□□□ 0.3
CBWD3-204ENST00000377349 SLC18A1P54219 525 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 OR2B6P58173 313 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 FAPQ12884 760 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 GSTA3Q16772 222 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 GTDC1Q4AE62 458 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 TMPPEQ6ZT21 453 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 MIER2Q8N344 545 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 GTPBP3Q969Y2 492 aaKnown RBP16.91■□□□□ 0.3
CBWD3-204ENST00000377349 USB1Q9BQ65 265 aaKnown RBP16.91■□□□□ 0.3
CBWD3-204ENST00000377349 CCDC106Q9BWC9 280 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 GRIP2Q9C0E4 1043 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 CACYBPQ9HB71 228 aaKnown RBP16.91■□□□□ 0.3
CBWD3-204ENST00000377349 P2RX2Q9UBL9 471 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 USH1CQ9Y6N9 552 aa16.91■□□□□ 0.3
CBWD3-204ENST00000377349 AGAP5A6NIR3 686 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 UQCRBP14927 111 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 IGHV1-2P23083 117 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 POLR2JP52435 117 aaKnown RBP16.9■□□□□ 0.3
CBWD3-204ENST00000377349 STX1BP61266 288 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 RPS26P11Q5JNZ5 115 aaPredicted RBP16.9■□□□□ 0.3
CBWD3-204ENST00000377349 MRPL2Q5T653 305 aaKnown RBP16.9■□□□□ 0.3
CBWD3-204ENST00000377349 LRRC74BQ6ZQY2 392 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 GALNT5Q7Z7M9 940 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 PEX5LQ8IYB4 626 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 LRRC8CQ8TDW0 803 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 DYDC1Q8WWB3 177 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 ITCHQ96J02 903 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 ARL5BQ96KC2 179 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 EXOSC3Q9NQT5 275 aaKnown RBP16.9■□□□□ 0.3
CBWD3-204ENST00000377349 ZIM2Q9NZV7 527 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 EMC3Q9P0I2 261 aa16.9■□□□□ 0.3
CBWD3-204ENST00000377349 A0A096LNT2 108 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 TMED7-TICAM2A0A0A6YYA0 188 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 POLR3GO15318 223 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-204ENST00000377349 CD5LO43866 347 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 DBIP07108 87 aaKnown RBP16.89■□□□□ 0.29
CBWD3-204ENST00000377349 DSTNP60981 165 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 PLAURQ03405 335 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 CADM2Q8N3J6 435 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 OIT3Q8WWZ8 545 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 MAELQ96JY0 434 aaKnown RBP16.89■□□□□ 0.29
CBWD3-204ENST00000377349 MTHFD2LQ9H903 347 aaPredicted RBP16.89■□□□□ 0.29
CBWD3-204ENST00000377349 RLIMQ9NVW2 624 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 TMED7Q9Y3B3 224 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 ANK2Q01484 3957 aa16.89■□□□□ 0.29
CBWD3-204ENST00000377349 TMEM247A6NEH6 219 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 CFAP73A6NFT4 308 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF724A8MTY0 619 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 PGM3O95394 542 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 GUSBP08236 651 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 GKN3PP0CG01 181 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 TACR3P29371 465 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 POLR2HP52434 150 aaKnown RBP16.88■□□□□ 0.29
CBWD3-204ENST00000377349 TXNL4AP83876 142 aaKnown RBP16.88■□□□□ 0.29
CBWD3-204ENST00000377349 PPA1Q15181 289 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 AGBL2Q5U5Z8 902 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 ABLIM2Q6H8Q1 611 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 SLC2A7Q6PXP3 512 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 ZNF836Q6ZNA1 936 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 VRK2Q86Y07 508 aa16.88■□□□□ 0.29
CBWD3-204ENST00000377349 CMIPQ8IY22 773 aa16.88■□□□□ 0.29
Retrieved 100 of 20,778 RNA–protein pairs in 57.2 ms