RNA–Protein interactions for RNA: ENST00000377047.8

GPC6-201, Transcript of glypican 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene GPC6, Length 6,467 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC6-201ENST00000377047 SLC6A19Q695T7 634 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 OR5T1Q8NG75 326 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 RSPRY1Q96DX4 576 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ARL6Q9H0F7 186 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 TP53TG5Q9Y2B4 290 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 OR5K3A6NET4 321 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 PRRT4C9JH25 899 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 CSNK1G2P78368 415 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 CCSMST1Q4G0I0 132 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 NDUFAF7Q7L592 441 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ADGRG5Q8IZF4 528 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ASB17Q8WXJ9 295 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 TM4SF18Q96CE8 201 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 MAST2Q6P0Q8 1798 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 DNAJB6O75190 326 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 DLSTP36957 453 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 GARNL3Q5VVW2 1013 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ZC3HAV1LQ96H79 300 aaKnown RBP12.67□□□□□ -0.38
GPC6-201ENST00000377047 DECR2Q9NUI1 292 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 DVL2O14641 736 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 SLCO2B1O94956 709 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 RAB3DO95716 219 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 MTHFD2P13995 350 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 HENMT1Q5T8I9 393 aaKnown RBP12.67□□□□□ -0.38
GPC6-201ENST00000377047 UBTD2Q8WUN7 234 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ZNF681Q96N22 645 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 KATNB1Q9BVA0 655 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 ARRDC1-AS1Q9H2J1 176 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 APMAPQ9HDC9 416 aa12.67□□□□□ -0.38
GPC6-201ENST00000377047 TMEM202A6NGA9 273 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 ARGFXA6NJG6 315 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 C2CD4DB7Z1M9 353 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 B3GALT4O96024 378 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 FURINP09958 794 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 CAV2P51636 162 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SEMA3BQ13214 749 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SLC36A2Q495M3 483 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 MARCH3Q86UD3 253 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 BPHLQ86WA6 291 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 OR2T11Q8NH01 316 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 NDNFQ8TB73 568 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 S100PBPQ96BU1 408 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SLAMF8Q9P0V8 285 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 UBQLN2Q9UHD9 624 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 TRBV4-1A0A0J9YWV2 114 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 ZNF593O00488 134 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 TNFRSF10CO14798 259 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SLC35E2P0CK97 266 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 TACR1P25103 407 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 EXOSC6Q5RKV6 272 aaKnown RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 LINC01465Q8N7H1 131 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 OR1J2Q8NGS2 313 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 HSD17B8Q92506 261 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 NLKQ9UBE8 527 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 TBC1D29Q9UFV1 150 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 CTNSO60931 367 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 GABRB3P28472 473 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 BIDP55957 195 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 UBALD2Q8IYN6 164 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 OR7G1Q8NGA0 311 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SLC38A5Q8WUX1 472 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 RGCCQ9H4X1 137 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 N4BP2Q86UW6 1770 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 FAM166BA8MTA8 275 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 ZNF780AO75290 641 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 OR8U9P0C7N5 309 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 ZNF684Q5T5D7 378 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 BCL7CQ8WUZ0 217 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 PSMF1Q92530 271 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 ZNF705EA8MWA4 302 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 ZNF736B4DX44 427 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 S100PP25815 95 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 NR4A2P43354 598 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 SIRT6Q8N6T7 355 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 FOXRED1Q96CU9 486 aaPredicted RBP12.66□□□□□ -0.38
GPC6-201ENST00000377047 UBXN10Q96LJ8 280 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 MED20Q9H944 212 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 TBX21Q9UL17 535 aa12.66□□□□□ -0.38
GPC6-201ENST00000377047 PRAMEF25A6NGN4 478 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 AGTR1P30556 359 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 AQP2P41181 271 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 STT3AP46977 705 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 CAMLGP49069 296 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 RAB31Q13636 194 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 OR4F15Q8NGB8 312 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 OR8J2Q8NGG1 315 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 CCDC32Q9BV29 185 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 TRAV36DV7A0A075B6V5 113 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 TNFSF12-TNFSF13A0A0A6YY99 330 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 ZNF587BE7ETH6 402 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 TNFSF12O43508 249 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 CD1CP29017 333 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 METRNLQ641Q3 311 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 NT5C3BQ969T7 300 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 GLIPR2Q9H4G4 154 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 OLAHQ9NV23 265 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 CD300LBA8K4G0 201 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 IL2RGP31785 369 aa12.65□□□□□ -0.38
GPC6-201ENST00000377047 RPP30P78346 268 aaKnown RBP12.65□□□□□ -0.38
GPC6-201ENST00000377047 PYCR3Q53H96 274 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 62.2 ms