RNA–Protein interactions for RNA: ENST00000376643.6

HDAC6-204, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 907 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-204ENST00000376643 WDR60Q8WVS4 1066 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 RAB8BQ92930 207 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 PKNOX2Q96KN3 472 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 ARMC7Q9H6L4 198 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 MTHFD2LQ9H903 347 aaPredicted RBP13.01□□□□□ -0.33
HDAC6-204ENST00000376643 MEAF6Q9HAF1 191 aa13.01□□□□□ -0.33
HDAC6-204ENST00000376643 MOV10Q9HCE1 1003 aaKnown RBP13.01□□□□□ -0.33
HDAC6-204ENST00000376643 THUMPD1Q9NXG2 353 aaKnown RBP13.01□□□□□ -0.33
HDAC6-204ENST00000376643 NUP214P35658 2090 aaPredicted RBP13□□□□□ -0.33
HDAC6-204ENST00000376643 TMED7-TICAM2A0A0A6YYA0 188 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 TMEM247A6NEH6 219 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 CFAP73A6NFT4 308 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 AGAP5A6NIR3 686 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 C9JVG2 144 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 SLCO1B7G3V0H7 640 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 ITM2AO43736 263 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 WNT11O96014 354 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 IGHV4-39P01824 125 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 THBS1P07996 1170 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 CD40P25942 277 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 TTKP33981 857 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 ACVR1BP36896 505 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 SLC1A3P43003 542 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 COPZ1P61923 177 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 CHRNB3Q05901 458 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 RAB35Q15286 201 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 MAPK14Q16539 360 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 PODNL1Q6PEZ8 512 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 PAQR6Q6TCH4 344 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 CLEC4FQ8N1N0 589 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 MUC15Q8N387 334 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 POMGNT2Q8NAT1 580 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 NEUROG1Q92886 237 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF775Q96BV0 537 aaPredicted RBP13□□□□□ -0.33
HDAC6-204ENST00000376643 MUS81Q96NY9 551 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 NUF2Q9BZD4 464 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 OBP2BQ9NPH6 170 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 TMED7Q9Y3B3 224 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 SLC25A15Q9Y619 301 aa13□□□□□ -0.33
HDAC6-204ENST00000376643 A0A096LPI6 279 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CENPVL1A0A0U1RR11 272 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CCDC154A6NI56 674 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 OR6C65A6NJZ3 312 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 HMGN4O00479 90 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 PGRP06401 933 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 GPIP06744 558 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 NR2F1P10589 423 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CREB1P16220 341 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 SLC25A16P16260 332 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CASP9P55211 416 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 H3F3AP84243 136 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CHRNEQ04844 493 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 LIN52Q52LA3 116 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 DNM1P46Q6ZS02 220 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 CXXC5Q7LFL8 322 aaKnown RBP12.99□□□□□ -0.33
HDAC6-204ENST00000376643 RNF130Q86XS8 419 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 ADGRG3Q86Y34 549 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 OR52N5Q8NH56 324 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 TMEM45BQ96B21 275 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF524Q96C55 264 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 ARL5BQ96KC2 179 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 OR52E6Q96RD3 313 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 INPP5KQ9BT40 448 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 SF3B5Q9BWJ5 86 aaKnown RBP12.99□□□□□ -0.33
HDAC6-204ENST00000376643 P2RX2Q9UBL9 471 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 PMF1-BGLAPU3KQ54 211 aa12.99□□□□□ -0.33
HDAC6-204ENST00000376643 KIAA1324LA8MWY0 1029 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-204ENST00000376643 H7C417 338 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 M0R1B8 84 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 SSX4O60224 188 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 RAMP1O60894 148 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 ADAM11O75078 769 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 VAMP5O95183 116 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 CD8AP01732 235 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 IGHV3-9P01782 118 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 IL6P05231 212 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 MPGP29372 298 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 FABP6P51161 128 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF83P51522 516 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 PRPS1P60891 318 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 FUT5Q11128 374 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF621Q6ZSS3 439 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 ZC3HAV1Q7Z2W4 902 aaKnown RBP12.98□□□□□ -0.33
HDAC6-204ENST00000376643 ZNF317Q96PQ6 595 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-204ENST00000376643 KCNS3Q9BQ31 491 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 TAPBPLQ9BX59 468 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 CACNG6Q9BXT2 260 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 AMBRA1Q9C0C7 1298 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 OR11A1Q9GZK7 315 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 CENPHQ9H3R5 247 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 RMND5AQ9H871 391 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 KCNK9Q9NPC2 374 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 AIG1Q9NVV5 245 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 NPAP1Q9NZP6 1156 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 OSGIN1Q9UJX0 560 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 FBXO9Q9UK97 447 aaPredicted RBP12.98□□□□□ -0.33
HDAC6-204ENST00000376643 B3GALT5Q9Y2C3 310 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 FLVCR1Q9Y5Y0 555 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 FREM1Q5H8C1 2179 aa12.98□□□□□ -0.33
HDAC6-204ENST00000376643 A8MV72 311 aaPredicted RBP12.97□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms