RNA–Protein interactions for RNA: ENST00000375755.7

MSH5-204, Transcript of mutS homolog 5, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene MSH5, Length 3,094 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-204ENST00000375755 PDZD9Q8IXQ8 264 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 TDHQ8IZJ6 230 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 EIF4E3Q8N5X7 224 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 SMRP1Q8NCR6 262 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 ZDHHC1Q8WTX9 485 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 OSTF1Q92882 214 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 TM4SF18Q96CE8 201 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 LRRC46Q96FV0 321 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 PRAP1Q96NZ9 151 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 GABRG3Q99928 467 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 C1QTNF2Q9BXJ5 285 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 ARL6Q9H0F7 186 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 FGF22Q9HCT0 170 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 NEUROD4Q9HD90 331 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 MTCH2Q9Y6C9 303 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 A0A1W2PPV9 198 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 PLPP1O14494 284 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 PPM1DO15297 605 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 SDC3O75056 442 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 OR2A4O95047 310 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 HOXB1P14653 301 aaPredicted RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 ANXA7P20073 488 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 PTGER1P34995 402 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 IFNGR2P38484 337 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 PCBP4P57723 403 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 RPS21P63220 83 aaKnown RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 PABPC1L2AQ5JQF8 200 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 GLDNQ6ZMI3 551 aaPredicted RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 NUDT18Q6ZVK8 323 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 CCL4L1Q8NHW4 92 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 RAD51AP1Q96B01 352 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 OR2A7Q96R45 310 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 YIPF4Q9BSR8 244 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 IFT27Q9BW83 186 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 IL20Q9NYY1 176 aa11.93□□□□□ -0.5
MSH5-204ENST00000375755 GPR55Q9Y2T6 319 aaPredicted RBP11.93□□□□□ -0.5
MSH5-204ENST00000375755 A0A0G2JN53 185 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 DAPL1A0PJW8 107 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 HOXA1P49639 335 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 DEFA5Q01523 94 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 FUT5Q11128 374 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 GK2Q14410 553 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 ACSM3Q53FZ2 586 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PDSS1Q5T2R2 415 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 NKAIN4Q8IVV8 208 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 MEIOBQ8N635 442 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 KCT2Q8NC54 265 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PIGXQ8TBF5 258 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 KAT2AQ92830 837 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SLC35G5Q96KT7 338 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 OR1F2PQ96R84 312 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 MED17Q9NVC6 651 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 C2orf42Q9NWW7 574 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 ZMIZ1Q9ULJ6 1067 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 NTNG1Q9Y2I2 539 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 NPFFR2Q9Y5X5 522 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 A0A0C4DFX4 3053 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 WDFY3Q8IZQ1 3526 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SHISA7A6NL88 538 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PLPP2O43688 288 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PIP5K1CO60331 668 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 REM1O75628 298 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SC5DO75845 299 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 HIST1H2ABP04908 130 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SERPIND1P05546 499 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 EPXP11678 715 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 IFNGR1P15260 489 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PPP3CBP16298 524 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PAICSP22234 425 aaKnown RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 AK4P27144 223 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 FAM69AQ5T7M9 428 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 HIST3H2AQ7L7L0 130 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 LINGO2Q7L985 606 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 DCUN1D3Q8IWE4 304 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 OR10H4Q8NGA5 316 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 HIST1H2ACQ93077 130 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 MRGPRX1Q96LB2 322 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SAMD8Q96LT4 415 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 ANKRD19PQ9H560 264 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SLC6A20Q9NP91 592 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 CD207Q9UJ71 328 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 ARHGEF17Q96PE2 2063 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 MPTX1A8MV57 137 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SIGLEC6O43699 453 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 LCMT2O60294 686 aaKnown RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 SLC35G4P0C7Q5 338 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 PPP2R1BP30154 601 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 TRAM2Q15035 370 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 ZNF660Q6AZW8 331 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 FAAP20Q6NZ36 180 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 ZNF620Q6ZNG0 422 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 FAM129CQ86XR2 697 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 MCATQ8IVS2 390 aaKnown RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 NAXDQ8IW45 347 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 AMER3Q8N944 861 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 OR5M9Q8NGP3 310 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 SMAP2Q8WU79 429 aaPredicted RBP11.92□□□□□ -0.5
MSH5-204ENST00000375755 DIO2Q92813 273 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 F2RL3Q96RI0 385 aa11.92□□□□□ -0.5
MSH5-204ENST00000375755 APOOQ9BUR5 198 aa11.92□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 22.8 ms