RNA–Protein interactions for RNA: ENST00000375740.7

MSH5-202, Transcript of mutS homolog 5, humanhuman

TSL 1 (best) BASIC

Gene MSH5, Length 2,669 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-202ENST00000375740 CXXC5Q7LFL8 322 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 PRSS42Q7Z5A4 293 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 CDK20Q8IZL9 346 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ZFP41Q8N8Y5 198 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 ZNF485Q8NCK3 441 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 AKAP1Q92667 903 aaKnown RBP eCLIP12.87□□□□□ -0.35
MSH5-202ENST00000375740 ZC3HAV1LQ96H79 300 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 SPACA7Q96KW9 195 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 MEPEQ9NQ76 525 aaPredicted RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 FLRT3Q9NZU0 649 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 MRPS33Q9Y291 106 aaKnown RBP12.87□□□□□ -0.35
MSH5-202ENST00000375740 MED31Q9Y3C7 131 aa12.87□□□□□ -0.35
MSH5-202ENST00000375740 CCDC85CA6NKD9 419 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 CHP2O43745 196 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 NCR1O76036 304 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 SOX30O94993 753 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 CFDP00746 253 aaPredicted RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 BMP7P18075 431 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 ATP6V1E1P36543 226 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 GABRA4P48169 554 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 MAP2K6P52564 334 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 BTN1A1Q13410 526 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 IL18Q14116 193 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 PLBD1Q6P4A8 553 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 ZNF613Q6PF04 617 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 SMARCD3Q6STE5 483 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 TMPRSS11FQ6ZWK6 438 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 ZNF595Q8IYB9 648 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 RCBTB1Q8NDN9 531 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 OR52L1Q8NGH7 329 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 OR13C2Q8NGS9 318 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 UFD1Q92890 307 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 MMABQ96EY8 250 aaPredicted RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 VSTM2LQ96N03 204 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 TGM7Q96PF1 710 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 ZNF649Q9BS31 505 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 MED20Q9H944 212 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 FBXL21Q9UKT6 434 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 CLDN16Q9Y5I7 305 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 TRIOO75962 3097 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 CLDN4O14493 209 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 BHLHE40O14503 412 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 SLC43A1O75387 559 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 LALBAP00709 142 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 IL1AP01583 271 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 RAF1P04049 648 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 PRKAR1AP10644 381 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 MAOAP21397 527 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 ACAA2P42765 397 aaKnown RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 GFERP55789 205 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 SKP1P63208 163 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 IGLV3-21P80748 117 aaPredicted RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 DSG2Q14126 1118 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 UBXN2BQ14CS0 331 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 CRTC2Q53ET0 693 aaPredicted RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 OR11H7Q8NGC8 314 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 SENP5Q96HI0 755 aaPredicted RBP12.86□□□□□ -0.35
MSH5-202ENST00000375740 DGAT2Q96PD7 388 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 UCK1Q9HA47 277 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 C14orf105Q9NVL8 296 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 PLCL2Q9UPR0 1127 aa12.86□□□□□ -0.35
MSH5-202ENST00000375740 A0A0B4J2E0 115 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 IGHV5-51A0A0C4DH38 117 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 LOC105378220A0A1B0GUY1 285 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 A0A1B0GWA3 101 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 A0A1B0GX12 115 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 ORC5O43913 435 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 RCBTB2O95199 551 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 NSA2O95478 260 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 MPC2O95563 127 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 SAGP10523 405 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 EXOSC2Q13868 293 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 FAM53BQ14153 422 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 NNATQ16517 81 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 DEFB133Q30KQ1 61 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 TMEM81Q6P7N7 255 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 NPSR1Q6W5P4 371 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 THSD4Q6ZMP0 1018 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 ZNF782Q6ZMW2 699 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 FBXW5Q969U6 566 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 SECISBP2Q96T21 854 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 LDHAL6BQ9BYZ2 381 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 SPRTNQ9H040 489 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 ERVMER34-1Q9H9K5 563 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 SOHLH2Q9NX45 425 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 DNAJB12Q9NXW2 375 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 TMEM184BQ9Y519 407 aaPredicted RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 ZC3H12DA2A288 527 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 NUPL2O15504 423 aaKnown RBP12.85□□□□□ -0.35
MSH5-202ENST00000375740 HLA-DQB1P01920 261 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 CXCL3P19876 107 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 PGDP52209 483 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 GARNL3Q5VVW2 1013 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 MZT2BQ6NZ67 158 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 ARSKQ6UWY0 536 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 BMP8AQ7Z5Y6 402 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 OR51A7Q8NH64 312 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 MARC2Q969Z3 335 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 SOSTQ9BQB4 213 aa12.85□□□□□ -0.35
MSH5-202ENST00000375740 TMEM43Q9BTV4 400 aa12.85□□□□□ -0.35
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms