RNA–Protein interactions for RNA: ENST00000375703.7

MSH5-201, Transcript of mutS homolog 5, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MSH5, Length 2,708 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5-201ENST00000375703 IQCF2Q8IXL9 164 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 SYS1Q8N2H4 156 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 SLC43A2Q8N370 569 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 OR4N2Q8NGD1 307 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 BAHD1Q8TBE0 780 aaPredicted RBP13.39□□□□□ -0.27
MSH5-201ENST00000375703 ADAMTS14Q8WXS8 1223 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 RSC1A1Q92681 617 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 OR2M2Q96R28 347 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CNN2Q99439 309 aaKnown RBP13.39□□□□□ -0.27
MSH5-201ENST00000375703 GABRG3Q99928 467 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 LRRN3Q9H3W5 708 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 EVA1BQ9NVM1 165 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 DNAJB12Q9NXW2 375 aaKnown RBP13.39□□□□□ -0.27
MSH5-201ENST00000375703 COPZ2Q9P299 210 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 CAMK2AQ9UQM7 478 aa13.39□□□□□ -0.27
MSH5-201ENST00000375703 C2orf74A8MZ97 194 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 NDUFB2O95178 105 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 P2RX3P56373 397 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 SRP54P61011 504 aaKnown RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 PSG6Q00889 435 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 SNTB2Q13425 540 aaKnown RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 PON3Q15166 354 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 MANEAQ5SRI9 462 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 UBE2Q1Q7Z7E8 422 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 SLC35F2Q8IXU6 374 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 CSNK1A1LQ8N752 337 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 LSMEM1Q8N8F7 131 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 C7orf57Q8NEG2 295 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 ZNF671Q8TAW3 534 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 HAVCR2Q8TDQ0 301 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 PATE1Q8WXA2 126 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 CCDC86Q9H6F5 360 aaKnown RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 SLCO1C1Q9NYB5 712 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 RPS6KB2Q9UBS0 482 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 GNG8Q9UK08 70 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 SPATA2Q9UM82 520 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 NOS1APO75052 506 aaPredicted RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 GATBO75879 557 aaKnown RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 UCHL1P09936 223 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 H2AFB2P0C5Z0 115 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 SLC35E2P0CK97 266 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 ANXA3P12429 323 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 EDNRAP25101 427 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 VSX2P58304 361 aaPredicted RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 ZNHIT3Q15649 155 aaPredicted RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 RPL22L1Q6P5R6 122 aaKnown RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 ULK3Q6PHR2 472 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 OVCH1Q7RTY7 1134 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 POMGNT2Q8NAT1 580 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 OR14A2Q96R54 314 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 ZFP64Q9NPA5 681 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 ST6GALNAC1Q9NSC7 600 aaPredicted RBP13.38□□□□□ -0.27
MSH5-201ENST00000375703 HRASLS2Q9NWW9 162 aa13.38□□□□□ -0.27
MSH5-201ENST00000375703 TRABD2BA6NFA1 517 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 IGKV1D-16P01601 117 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ANKRD34CP0C6C1 535 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 CXCL3P19876 107 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 RPS11P62280 158 aaKnown RBP eCLIP13.37□□□□□ -0.27
MSH5-201ENST00000375703 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 FAM109BQ6ICB4 259 aaPredicted RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 MTFR2Q6P444 385 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 LINC00114Q6XXX2 140 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ZNF782Q6ZMW2 699 aaPredicted RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 LUZP2Q86TE4 346 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 DACT3Q96B18 629 aaPredicted RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 ELSPBP1Q96BH3 223 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 PDCD1LG2Q9BQ51 273 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ORAI3Q9BRQ5 295 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ICAM5Q9UMF0 924 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 MCIDASD6RGH6 385 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 KLF8O95600 359 aaPredicted RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 MT-ND4P03905 459 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 RPL4P36578 427 aaKnown RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 LGALS3BPQ08380 585 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 HSD17B12Q53GQ0 312 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 SGTBQ96EQ0 304 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 GPR137Q96N19 417 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 MKKSQ9NPJ1 570 aaPredicted RBP13.37□□□□□ -0.27
MSH5-201ENST00000375703 CD93Q9NPY3 652 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 NRIP3Q9NQ35 241 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ADAM18Q9Y3Q7 739 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
MSH5-201ENST00000375703 TNFRSF10CO14798 259 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 RDH16O75452 317 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 SYPP08247 313 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 IFI6P09912 130 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 PSMB10P40306 273 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 RAB38P57729 211 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ARPC4P59998 168 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 GSG1Q2KHT4 349 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ALG11Q2TAA5 492 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ZBTB37Q5TC79 503 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 SLC22A10Q63ZE4 541 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 KIRREL2Q6UWL6 708 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 BAIAP2L2Q6UXY1 529 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 BTN2A1Q7KYR7 527 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 RNF44Q7L0R7 432 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 ZNF550Q7Z398 422 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 SLITRK4Q8IW52 837 aa13.36□□□□□ -0.27
MSH5-201ENST00000375703 IZUMO1Q8IYV9 350 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms