RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 ANKRD19PQ9H560 264 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 HHATLQ9HCP6 504 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 NRIP3Q9NQ35 241 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 SCN9AQ15858 1988 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 KIAA1551Q9HCM1 1747 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 A0A087WUU8 490 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 A0A0A6YYH2 397 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 A6NJ64 397 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 H3BML4 177 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 SMLR1H3BR10 107 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 LILRB3O75022 631 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 IFNA2P01563 188 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 PDGFAP04085 211 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 F13BP05160 661 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 NFYAP23511 347 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-203ENST00000375274 SLC26A5P58743 744 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 PLP2Q04941 152 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 RPE65Q16518 533 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 PAQR6Q6TCH4 344 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 CHRDL2Q6WN34 429 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 PTOV1Q86YD1 416 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 BPIFB2Q8N4F0 458 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 ARRDC3Q96B67 414 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 LYSMD1Q96S90 227 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 NEURL2Q9BR09 285 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 TAAR2Q9P1P5 351 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 UBE2J1Q9Y385 318 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-203ENST00000375274 SIPA1L3O60292 1781 aaPredicted RBP10.74□□□□□ -0.69
PTCH1-203ENST00000375274 AGPAT2O15120 278 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 IFNA5P01569 189 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 HLA-AP01891 365 aaKnown RBP10.74□□□□□ -0.69
PTCH1-203ENST00000375274 GAAP10253 952 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 TPT1P13693 172 aaKnown RBP10.74□□□□□ -0.69
PTCH1-203ENST00000375274 CYHR1Q6ZMK1 362 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 PRICKLE2Q7Z3G6 844 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 GDF7Q7Z4P5 450 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 BADQ92934 168 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 TOMM40LQ969M1 308 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 UBQLN4Q9NRR5 601 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 GLTPQ9NZD2 209 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 CAMK2AQ9UQM7 478 aa10.74□□□□□ -0.69
PTCH1-203ENST00000375274 SLC33A1O00400 549 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CRTAPO75718 401 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ABLIM3O94929 683 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 TP53P04637 393 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 IGFBP1P08833 259 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PRR35P0CG20 571 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 UBBP0CG47 229 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 UBCP0CG48 685 aaKnown RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 F3P13726 295 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ETV5P41161 510 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 HTR3AP46098 478 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 VEGFCP49767 419 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ETV1P50549 477 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CSNK1G2P78368 415 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SORDQ00796 357 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MC2RQ01718 297 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 TNFRSF17Q02223 184 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 NKG7Q16617 165 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZMAT1Q5H9K5 638 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 WBP2NLQ6ICG8 309 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ACSM5Q6NUN0 579 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 FAHD1Q6P587 224 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RSPO2Q6UXX9 243 aaPredicted RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MFSD9Q8NBP5 474 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 DIO2Q92813 273 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF649Q9BS31 505 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ALG12Q9BV10 488 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ELOVL3Q9HB03 270 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF226Q9NYT6 803 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ATPIF1Q9UII2 106 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CBLCQ9ULV8 474 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 RNF215Q9Y6U7 377 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PIAS3Q9Y6X2 628 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 TRABD2BA6NFA1 517 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 C1QBP02746 253 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MAKP20794 623 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 S100A12P80511 92 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 LCN10Q6JVE6 187 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 SLC48A1Q6P1K1 146 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ABHD17CQ6PCB6 329 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZNF709Q8N972 641 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 OR7G2Q8NG99 324 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 FGF13Q92913 245 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 OR14A2Q96R54 314 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 HCAR1Q9BXC0 346 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 UNKLQ9H9P5 680 aaKnown RBP10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZFP57Q9NU63 452 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 GDE1Q9NZC3 331 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MICAL3Q7RTP6 2002 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 PRSS38A1L453 326 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 A6NIZ1 184 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 H0YGG7 62 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 P2RX6O15547 441 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ALX3O95076 343 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ZDHHC11BP0C7U3 371 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 MAOAP21397 527 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 TUBG1P23258 451 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 CCR6P51684 374 aa10.73□□□□□ -0.69
PTCH1-203ENST00000375274 ARF3P61204 181 aaPredicted RBP10.73□□□□□ -0.69
Retrieved 100 of 20,778 RNA–protein pairs in 53.1 ms