RNA–Protein interactions for RNA: ENST00000374877.7

CCDC40-203, Transcript of coiled-coil domain containing 40, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CCDC40, Length 3,544 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-203ENST00000374877 HRASLSQ9HDD0 168 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PRDM7Q9NQW5 492 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 CMC2Q9NRP2 79 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ZBTB32Q9Y2Y4 487 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 NPTNQ9Y639 398 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 SESN1Q9Y6P5 492 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 TICRRQ7Z2Z1 1910 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PROS1P07225 676 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 C5AR1P21730 350 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 RAD52P43351 418 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 GDI2P50395 445 aaKnown RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 CCR9P51686 369 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 KRT33BQ14525 404 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 MAPK14Q16539 360 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 HES5Q5TA89 166 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 FAAP20Q6NZ36 180 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 FAM198BQ6UWH4 519 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 CMTM4Q8IZR5 234 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 ARL14Q8N4G2 192 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 OR51L1Q8NGJ5 315 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 OR4C6Q8NH72 309 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 CXorf58Q96LI9 332 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PRSS27Q9BQR3 290 aa10.24□□□□□ -0.77
CCDC40-203ENST00000374877 PITHD1Q9GZP4 211 aaPredicted RBP10.24□□□□□ -0.77
CCDC40-203ENST00000374877 MYO9BQ13459 2157 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 NPIPA5A0A0B4J1W7 369 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 TRAPPC13A5PLN9 417 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 NPIPA7E9PJI5 369 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ARL6IP5O75915 188 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 RCBTB2O95199 551 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 PPP1R3DO95685 299 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 NPIPA8P0DM63 369 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SRFP11831 508 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CXCL2P19875 107 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 POU3F2P20265 443 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 TUSC1Q2TAM9 212 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 METTL11BQ5VVY1 283 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 METRNLQ641Q3 311 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF776Q68DI1 518 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ALKAL2Q6UX46 152 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CDK20Q8IZL9 346 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ESX1Q8N693 406 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF433Q8N7K0 673 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 TTLQ8NG68 377 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR2A1Q8NGT9 310 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR52I2Q8NH67 350 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CXorf40AQ8TE69 158 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ST8SIA4Q92187 359 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 B3GNT4Q9C0J1 378 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 MS4A7Q9GZW8 240 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CCDC86Q9H6F5 360 aaKnown RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 MTHFD2LQ9H903 347 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 MRPS30Q9NP92 439 aaKnown RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CA10Q9NS85 328 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 GIMAP1-GIMAP5A0A087WTJ2 511 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 BET1O15155 118 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SERPINA3P01011 423 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 EGFP01133 1207 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZP3P21754 424 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF136P52737 540 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 KIAA1024LP59773 190 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 DPTQ07507 201 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CST6Q15828 149 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 APOOLQ6UXV4 268 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CMIPQ8IY22 773 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR7G2Q8NG99 324 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR6M1Q8NGM8 313 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 FAM131CQ96AQ9 280 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZMYND19Q96E35 227 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 GIMAP5Q96F15 307 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 PDCD1LG2Q9BQ51 273 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 LIN7BQ9HAP6 207 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZDHHC4Q9NPG8 344 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 KIF25Q9UIL4 384 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 KCNMB2Q9Y691 235 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 DUXAA6NLW8 204 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 PTHLHP12272 177 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 ZNF3P17036 446 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 HTR2AP28223 471 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 NAA10P41227 235 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 PSMA6P60900 246 aaKnown RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SIM1P81133 766 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 TDGQ13569 410 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SFRP5Q5T4F7 317 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 MRM1Q6IN84 353 aaKnown RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 PTCRAQ6ISU1 281 aaPredicted RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR4N5Q8IXE1 308 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 UXS1Q8NBZ7 420 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 OR2L5Q8NG80 312 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 BPIFA2Q96DR5 249 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 KLHL15Q96M94 604 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SLC25A18Q9H1K4 315 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 USP36Q9P275 1121 aaKnown RBP10.23□□□□□ -0.77
CCDC40-203ENST00000374877 KLK11Q9UBX7 282 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 CES1P1Q9UKY3 287 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 SLC35A3Q9Y2D2 325 aa10.23□□□□□ -0.77
CCDC40-203ENST00000374877 TRAV1-2A0A0B4J238 106 aa10.22□□□□□ -0.77
CCDC40-203ENST00000374877 LGALS8O00214 317 aa10.22□□□□□ -0.77
CCDC40-203ENST00000374877 PRAF2O60831 178 aa10.22□□□□□ -0.77
CCDC40-203ENST00000374877 PPM1BO75688 479 aa10.22□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms