RNA–Protein interactions for RNA: ENST00000374730.2

USP48-202, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 4

Gene USP48, Length 570 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-202ENST00000374730 OR4D11Q8NGI4 311 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OR8J1Q8NGP2 316 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 NT5CQ8TCD5 201 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ABHD5Q8WTS1 349 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RPL3LQ92901 407 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 RAB8BQ92930 207 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ABTB1Q969K4 478 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 PRRC1Q96M27 445 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OR2M4Q96R27 311 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 BBS4Q96RK4 519 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MYADMQ96S97 322 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ARHGDIGQ99819 225 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 C17orf62Q9BQA9 187 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 KXD1Q9BQD3 176 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 APOOQ9BUR5 198 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TAPBPLQ9BX59 468 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TM2D2Q9BX73 214 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 PINK1Q9BXM7 581 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RSPO3Q9BXY4 272 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 POLDIP3Q9BY77 421 aaKnown RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 SLC17A9Q9BYT1 436 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 DSN1Q9H410 356 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OSGEPL1Q9H4B0 414 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ANKRD19PQ9H560 264 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 FGF22Q9HCT0 170 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 GIMAP4Q9NUV9 329 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CLN6Q9NWW5 311 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 RHBDL2Q9NX52 303 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MS4A12Q9NXJ0 267 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 FBXL12Q9NXK8 326 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 GPR83Q9NYM4 423 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 OR6C2Q9NZP2 312 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CALML5Q9NZT1 146 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SELENONQ9NZV5 590 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 TRPC4Q9UBN4 977 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 CES1P1Q9UKY3 287 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MKLN1Q9UL63 735 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SNX7Q9UNH6 387 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 ENTPD4Q9Y227 616 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 KCNK6Q9Y257 313 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SLC9A8Q9Y2E8 581 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 IFT52Q9Y366 437 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 SIRT4Q9Y6E7 314 aaPredicted RBP4.41□□□□□ -1.7
USP48-202ENST00000374730 COLEC10Q9Y6Z7 277 aa4.41□□□□□ -1.7
USP48-202ENST00000374730 MYO9BQ13459 2157 aa4.4□□□□□ -1.7
USP48-202ENST00000374730 CDH23Q9H251 3354 aa4.4□□□□□ -1.7
USP48-202ENST00000374730 SCN3AQ9NY46 2000 aa4.4□□□□□ -1.7
USP48-202ENST00000374730 F5P12259 2224 aa4.4□□□□□ -1.7
USP48-202ENST00000374730 GIMAP1-GIMAP5A0A087WTJ2 511 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 A0A0G2JN53 185 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 IRGMA1A4Y4 181 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 FUOMA2VDF0 154 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ISPDA4D126 451 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 AGAP5A6NIR3 686 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 SAGE2PA6NJ88 616 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 OR52A4PA6NMU1 304 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 M0R129 80 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 CCRL2O00421 344 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 RRHO14718 337 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ZW10O43264 779 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 OR10H3O60404 316 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ENTPD6O75354 484 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 EPPINO95925 133 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 DNTTP04053 509 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 SERPIND1P05546 499 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 CHRM4P08173 479 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 IFI6P09912 130 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 LAMP2P13473 410 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 POU2F1P14859 743 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 CSNK2A2P19784 350 aaPredicted RBP4.4□□□□□ -1.71
USP48-202ENST00000374730 GSTM3P21266 225 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 GADD45AP24522 165 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 DUSP1P28562 367 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 CSTF2P33240 577 aaKnown RBP eCLIP4.4□□□□□ -1.71
USP48-202ENST00000374730 GRK5P34947 590 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ETV6P41212 452 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 RGS6P49758 472 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 BCAP31P51572 246 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 PPP5CP53041 499 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 RPS15AP62244 130 aaKnown RBP4.4□□□□□ -1.71
USP48-202ENST00000374730 LSM3P62310 102 aaKnown RBP4.4□□□□□ -1.71
USP48-202ENST00000374730 RELAQ04206 551 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 PRKCDQ05655 676 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 RGS1Q08116 209 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ITGADQ13349 1161 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 KRT33BQ14525 404 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 NFATC4Q14934 902 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 KIR2DS3Q14952 304 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 NCF4Q15080 339 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 INAQ16352 499 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 SYT16Q17RD7 645 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 TRIM16LQ309B1 348 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ARMCX4Q5H9R4 360 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 TMEM196Q5HYL7 178 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ENTPD8Q5MY95 495 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 C9orf50Q5SZB4 431 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 TMEM236Q5W0B7 351 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 FAM205BPQ63HN1 556 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 ABLIM2Q6H8Q1 611 aa4.4□□□□□ -1.71
USP48-202ENST00000374730 C1orf94Q6P1W5 598 aa4.4□□□□□ -1.71
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms