RNA–Protein interactions for RNA: ENST00000374606.9

PFDN6-201, Transcript of prefoldin subunit 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PFDN6, Length 740 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PFDN6-201ENST00000374606 TTC33Q6PID6 262 aaPredicted RBP15.84■□□□□ 0.13
PFDN6-201ENST00000374606 Q6ZS92 163 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 ZBTB49Q6ZSB9 765 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 PNPLA5Q7Z6Z6 429 aaPredicted RBP15.84■□□□□ 0.13
PFDN6-201ENST00000374606 CBR4Q8N4T8 237 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 TMEM239Q8WW34 195 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 NRG4Q8WWG1 115 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 BARD1Q99728 777 aaKnown RBP15.84■□□□□ 0.13
PFDN6-201ENST00000374606 ZNF426Q9BUY5 554 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 VCXQ9H320 206 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 UBQLN3Q9H347 655 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 KRCC1Q9NPI7 259 aaPredicted RBP15.84■□□□□ 0.13
PFDN6-201ENST00000374606 OSGIN1Q9UJX0 560 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 PCNX3Q9H6A9 2034 aa15.84■□□□□ 0.13
PFDN6-201ENST00000374606 LRBAP50851 2863 aa15.83■□□□□ 0.13
PFDN6-201ENST00000374606 PRRC2CQ9Y520 2896 aaKnown RBP15.83■□□□□ 0.13
PFDN6-201ENST00000374606 CELSR2Q9HCU4 2923 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 TMED7-TICAM2A0A0A6YYA0 188 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 C7orf72A4D263 438 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 FAM166BA8MTA8 275 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 PDLIM1O00151 329 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 KPNA4O00629 521 aaPredicted RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 EI24O14681 340 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 NTN1O95631 604 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 CLDN1O95832 211 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 ZNF17P17021 662 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 IFNGR2P38484 337 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 APOBEC1P41238 236 aaKnown RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 UGT2B15P54855 530 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 PRR30Q53SZ7 412 aaPredicted RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 SLC22A16Q86VW1 577 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 GTPBP8Q8N3Z3 284 aaPredicted RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 AQP11Q8NBQ7 271 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 OR9Q2Q8NGE9 314 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 OR14L1PQ8NHC6 308 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 PRR7Q8TB68 274 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 PIGXQ8TBF5 258 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 PSD2Q9BQI7 771 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 OR2B2Q9GZK3 357 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 C8orf4Q9NR00 106 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 SERINC1Q9NRX5 453 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 RPH3AQ9Y2J0 694 aaPredicted RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 TMED7Q9Y3B3 224 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 MED31Q9Y3C7 131 aa15.83■□□□□ 0.12
PFDN6-201ENST00000374606 MAGED1Q9Y5V3 778 aaPredicted RBP15.83■□□□□ 0.12
PFDN6-201ENST00000374606 SHISA8B8ZZ34 492 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 SOCS2O14508 198 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 SUSD5O60279 629 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 PIP5K1CO60331 668 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 TRAPPC6AO75865 159 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 GLSO94925 669 aaPredicted RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 RASAL1O95294 804 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 CCNA2P20248 432 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 PRKACGP22612 351 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 ELK4P28324 431 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 ADH6P28332 368 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 DAG1Q14118 895 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 HYAL4Q2M3T9 481 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 ZNF800Q2TB10 664 aaPredicted RBP eCLIP15.82■□□□□ 0.128e-12■□□□□ 8.5
PFDN6-201ENST00000374606 GLYR1Q49A26 553 aaPredicted RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 TBPL2Q6SJ96 375 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 LINC00114Q6XXX2 140 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 MBOAT2Q6ZWT7 520 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 NRMQ8IXM6 262 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 RNF113BQ8IZP6 322 aaKnown RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 FAM109AQ8N4B1 249 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 TMEM251Q8N6I4 163 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 RBMXL3Q8N7X1 1067 aaKnown RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 ATG16L2Q8NAA4 619 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 FAM83FQ8NEG4 500 aaPredicted RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 POC1BQ8TC44 478 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 NPAS1Q99742 590 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 RBM4BQ9BQ04 359 aaKnown RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 PIGQQ9BRB3 760 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 TMEM43Q9BTV4 400 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 RBM4Q9BWF3 364 aaKnown RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 OSBPL10Q9BXB5 764 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 SLC19A3Q9BZV2 496 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 KLHL4Q9C0H6 718 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 COQ10BQ9H8M1 238 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 CHRNA9Q9UGM1 479 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 B3GNT3Q9Y2A9 372 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 MRPS18CQ9Y3D5 142 aaKnown RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 SPIN1Q9Y657 262 aaPredicted RBP15.82■□□□□ 0.12
PFDN6-201ENST00000374606 CRYBG3Q68DQ2 2970 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 NCKAP5O14513 1909 aa15.82■□□□□ 0.12
PFDN6-201ENST00000374606 IGKV1D-42A0A075B6H8 117 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 TMEM72A0PK05 275 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 WIPF3A6NGB9 483 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 HPRP00739 348 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 ANXA8P13928 327 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 ZNF24P17028 368 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 GCKP35557 465 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 VHLP40337 213 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 MAGEA5P43359 124 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 PPIAP62937 165 aaKnown RBP15.81■□□□□ 0.12
PFDN6-201ENST00000374606 PPP2R2BQ00005 443 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 PMP22Q01453 160 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 SELENBP1Q13228 472 aa15.81■□□□□ 0.12
PFDN6-201ENST00000374606 ZNF770Q6IQ21 691 aaPredicted RBP15.81■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms