RNA–Protein interactions for RNA: ENST00000373887.7

TRAF1-201, Transcript of TNF receptor associated factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TRAF1, Length 6,324 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF1-201ENST00000373887 OLAHQ9NV23 265 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 GLTPQ9NZD2 209 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 RIMS3Q9UJD0 308 aa13.38□□□□□ -0.27
TRAF1-201ENST00000373887 FANCGO15287 622 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 AP1G1O43747 822 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 PRDX3P30048 256 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 VEGFCP49767 419 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 STEAP3Q658P3 488 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 OR8J2Q8NGG1 315 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 RBMXL1Q96E39 390 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 NUDT22Q9BRQ3 303 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ENTPD2Q9Y5L3 495 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 B4DXG7 233 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 H3BMQ9 156 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SIGLEC6O43699 453 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 TUSC2O75896 110 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 EFNA3P52797 238 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 KIR2DS3Q14952 304 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SLC43A2Q8N370 569 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF436Q9C0F3 470 aaPredicted RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SLC25A31Q9H0C2 315 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 DDX31Q9H8H2 851 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ANKRD10Q9NXR5 420 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 TMEM181Q9P2C4 612 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 OR7A17O14581 309 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 DNAJB6O75190 326 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SNAPINO95295 136 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 FXNQ16595 210 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ACSM3Q53FZ2 586 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 COX15Q7KZN9 410 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 MIB2Q96AX9 1013 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SGK3Q96BR1 496 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 MRI1Q9BV20 369 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 CHRDQ9H2X0 955 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 PATZ1Q9HBE1 687 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SMCO4Q9NRQ5 59 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ENPP4Q9Y6X5 453 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SDK1Q7Z5N4 2213 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 LOC101059915A0A1B0GWI6 518 aaPredicted RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 CSNK1A1P48729 337 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 UBE2KP61086 200 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SORDQ00796 357 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 RIPPLY1Q0D2K3 151 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 PDLIM3Q53GG5 364 aaPredicted RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 LCTLQ6UWM7 567 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF417Q8TAU3 575 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 RTP3Q9BQQ7 232 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 OCSTAMPQ9BR26 566 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 PCDHA9Q9Y5H5 950 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 MEGF11A6BM72 1044 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 RAB27BO00194 218 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 TXNDC12O95881 172 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 UBL4AP11441 157 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 RPS5P46782 204 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 ZNF140P52738 457 aaPredicted RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 CDONQ4KMG0 1287 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 SBSNQ6UWP8 590 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 B3GNT9Q6UX72 402 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 TMEM184AQ6ZMB5 413 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 B3GNT7Q8NFL0 401 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 QRSL1Q9H0R6 528 aaKnown RBP13.37□□□□□ -0.27
TRAF1-201ENST00000373887 CSNK1G1Q9HCP0 422 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 DYNLRB1Q9NP97 96 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 TM7SF3Q9NS93 570 aa13.37□□□□□ -0.27
TRAF1-201ENST00000373887 PRAMEF27A3QJZ7 478 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 KRBA1A5PL33 1030 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 NME4O00746 187 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 B4GAT1O43505 415 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 C1orf105O95561 183 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 F11P03951 625 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 NDUFA6P56556 154 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 CXADRP78310 365 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 CDK5R2Q13319 367 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 SIX1Q15475 284 aaPredicted RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 PRAMEF9Q5VWM5 478 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 NLRP8Q86W28 1048 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 KDM1BQ8NB78 822 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 OR5D14Q8NGL3 314 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 MICU1Q9BPX6 476 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 A6NIZ1 184 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 HLA-AP01891 365 aaKnown RBP13.36□□□□□ -0.27
TRAF1-201ENST00000373887 OR1D5P58170 312 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 RAP1BP61224 184 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 RAP1AP62834 184 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 BTN1A1Q13410 526 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 DUSP7Q16829 419 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 CTSL3PQ5NE16 218 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 PRAMEF20Q5VT98 475 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 NXPE3Q969Y0 559 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 INTS14Q96SY0 518 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 PRRT1Q99946 306 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 HCAR1Q9BXC0 346 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 GFOD1Q9NXC2 390 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 GHRLQ9UBU3 117 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 BET1O15155 118 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 FADS1O60427 444 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 SEC14L2O76054 403 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 LSAMPQ13449 338 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 SERTAD2Q14140 314 aa13.36□□□□□ -0.27
TRAF1-201ENST00000373887 FAM26DQ5JW98 314 aa13.36□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.9 ms