RNA–Protein interactions for RNA: ENST00000373589.8

HDAC8-209, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 1,740 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-209ENST00000373589 SOCS6O14544 535 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 SLC22A1O15245 554 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 GMFGO60234 142 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 CSO75390 466 aaKnown RBP14.29□□□□□ -0.12
HDAC8-209ENST00000373589 OR2J2O76002 312 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 FBXO45P0C2W1 286 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 TMED10P49755 219 aaKnown RBP14.29□□□□□ -0.12
HDAC8-209ENST00000373589 ETV1P50549 477 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 EXT1Q16394 746 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 BTBD16Q32M84 506 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 NIPAL3Q6P499 406 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 ARHGAP11AQ6P4F7 1023 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 C19orf48Q6RUI8 117 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 PAQR6Q6TCH4 344 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 SLC15A4Q8N697 577 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 PTP4A1Q93096 173 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 HCAR1Q9BXC0 346 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 RACGAP1Q9H0H5 632 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 MMP25Q9NPA2 562 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 H2AFY2Q9P0M6 372 aaPredicted RBP14.29□□□□□ -0.12
HDAC8-209ENST00000373589 PISDQ9UG56 409 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 PCDHGA1Q9Y5H4 931 aa14.29□□□□□ -0.12
HDAC8-209ENST00000373589 A0A1W2PNU3 283 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 C4orf47A7E2U8 309 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 B4DXG7 233 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 MCIDASD6RGH6 385 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 PLD2O14939 933 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 APOL3O95236 402 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 WISP1O95388 367 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 NUDT14O95848 222 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 GP1BBP13224 206 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 HK1P19367 917 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 FOLR3P41439 243 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 PRPS1P60891 318 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 LTBQ06643 244 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 C17orf67Q0P5P2 114 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 ITGADQ13349 1161 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 QPRTQ15274 297 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 SPHARQ15513 63 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 COL28A1Q2UY09 1125 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 C6orf15Q6UXA7 325 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 DPY19L2P2Q6ZN68 376 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 MEPCEQ7L2J0 689 aaKnown RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 TIPARPQ7Z3E1 657 aaKnown RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 OR11G2Q8NGC1 345 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 M1APQ8TC57 530 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 SLC22A8Q8TCC7 542 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 RPL3LQ92901 407 aaKnown RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 KTI12Q96EK9 354 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 MOGAT1Q96PD6 335 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 OPALINQ96PE5 141 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 RASL10BQ96S79 203 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 GPX7Q96SL4 187 aaPredicted RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 HIF3AQ9Y2N7 669 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 EXOSC1Q9Y3B2 195 aaKnown RBP14.28□□□□□ -0.12
HDAC8-209ENST00000373589 PCDHGA3Q9Y5H0 932 aa14.28□□□□□ -0.12
HDAC8-209ENST00000373589 RIIAD1A6NNX1 92 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 C9orf172C9J069 976 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 PRR23D1E9PI22 279 aaPredicted RBP14.27□□□□□ -0.12
HDAC8-209ENST00000373589 J3QRE1 110 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 ARPC3O15145 178 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 BCL10O95999 233 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 MT-CO3P00414 261 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 IGHEP01854 428 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 SCG5P05408 212 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 ASAH2BP0C7U1 165 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 JMJD7P0C870 316 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 HSMCR30P0CW71 290 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 PRR23D2P0DMB1 279 aaPredicted RBP14.27□□□□□ -0.12
HDAC8-209ENST00000373589 CXCR1P25024 350 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 LIMK1P53667 647 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 ROR2Q01974 943 aaKnown RBP14.27□□□□□ -0.12
HDAC8-209ENST00000373589 NTRK2Q16620 822 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 FCRLBQ6BAA4 426 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 SLC37A3Q8NCC5 494 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 KISS1RQ969F8 398 aaPredicted RBP14.27□□□□□ -0.12
HDAC8-209ENST00000373589 TAAR8Q969N4 342 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 ERMAPQ96PL5 475 aaPredicted RBP14.27□□□□□ -0.12
HDAC8-209ENST00000373589 JAM3Q9BX67 310 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 MED20Q9H944 212 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 NRIP3Q9NQ35 241 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 NANSQ9NR45 359 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 TAS2R10Q9NYW0 307 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 PCDHGB6Q9Y5F9 930 aa14.27□□□□□ -0.12
HDAC8-209ENST00000373589 TMEM129A0AVI4 362 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 ANKUB1A6NFN9 424 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 MYL12BO14950 172 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 IGHA1P01876 353 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 CELA2AP08217 269 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 RAB40ALP0C0E4 278 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 TSPAN19P0C672 248 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 LIMS3P0CW19 117 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 LIMS4P0CW20 117 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 ZNF3P17036 446 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 MYL12AP19105 171 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 SLC2A5P22732 501 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 GADD45AP24522 165 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 NOS3P29474 1203 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 PTGDSP41222 190 aa14.27□□□□□ -0.13
HDAC8-209ENST00000373589 POLR2HP52434 150 aaKnown RBP14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms