RNA–Protein interactions for RNA: ENST00000373243.6

NCDN-202, Transcript of neurochondrin, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCDN, Length 3,683 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCDN-202ENST00000373243 EEF1A1P5Q5VTE0 462 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 TMED4Q7Z7H5 227 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 CBLN2Q8IUK8 224 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 GID4Q8IVV7 300 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SFTPA1Q8IWL2 248 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ARL14Q8N4G2 192 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ZNF676Q8N7Q3 588 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 OR1M1Q8NGA1 313 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PTCHD1Q96NR3 888 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 UBQLN3Q9H347 655 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 UFSP2Q9NUQ7 469 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ZSCAN32Q9NX65 697 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 MGAT4CQ9UBM8 478 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PLEKHB1Q9UF11 243 aaPredicted RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 AUP1Q9Y679 476 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 AP1M2Q9Y6Q5 423 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 MFSD2BA6NFX1 497 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 LGI1O95970 557 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 CLUP10909 449 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 FPR3P25089 353 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 BCL6P41182 706 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 STARP49675 285 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 LRRN1Q6UXK5 716 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SLC39A5Q6ZMH5 540 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 OR5K2Q8NHB8 316 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 TSEN15Q8WW01 171 aaKnown RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 TMEM239Q8WW34 195 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 GHSRQ92847 366 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 CNRIP1Q96F85 164 aaPredicted RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 MAP3K3Q99759 626 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 EVA1AQ9H8M9 152 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ACSS1Q9NUB1 689 aaPredicted RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 CDH10Q9Y6N8 788 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ACOD1A6NK06 481 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 RNF13O43567 381 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 EIF1BO60739 113 aaKnown RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 FZD7O75084 574 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SPDEFO95238 335 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 TGM6O95932 706 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 LIMS3P0CW19 117 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 LIMS4P0CW20 117 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 CTSEP14091 401 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 GABRB1P18505 474 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ATP5A1P25705 553 aaKnown RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 S100PP25815 95 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ITGB7P26010 798 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 EIF1P41567 113 aaKnown RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 EVX1P49640 407 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 HMGA2P52926 109 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SHC2P98077 582 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 MESP2Q0VG99 397 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SERTAD2Q14140 314 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 LRRC37A5PQ49AS3 106 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PRRT3Q5FWE3 981 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ZNF547Q8IVP9 402 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PDZD9Q8IXQ8 264 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PFN4Q8NHR9 129 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ZNF563Q8TA94 476 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 PMM1Q92871 262 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 BPIFA2Q96DR5 249 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 HS6ST2Q96MM7 605 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 ADAT1Q9BUB4 502 aaKnown RBP11.23□□□□□ -0.61
NCDN-202ENST00000373243 PHF11Q9UIL8 331 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 TANC1Q9C0D5 1861 aa11.23□□□□□ -0.61
NCDN-202ENST00000373243 SPAG17Q6Q759 2223 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 A8MVJ9 347 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 DVL2O14641 736 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 HIST1H2ABP04908 130 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 ACAA1P09110 424 aaPredicted RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 P2RY2P41231 377 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 PSMA6P60900 246 aaKnown RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 PITPNAQ00169 270 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 HIST3H2AQ7L7L0 130 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 SSX6Q7RTT6 188 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 GDF7Q7Z4P5 450 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 THEM6Q8WUY1 208 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 SMPDL3BQ92485 455 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 HIST1H2ACQ93077 130 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 CHFRQ96EP1 664 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 ADAD1Q96M93 576 aaKnown RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 SSX3Q99909 188 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 MARVELD1Q9BSK0 173 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 TMEM43Q9BTV4 400 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 MTHFD2LQ9H903 347 aaPredicted RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 SYNPO2LQ9H987 977 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 PRDM9Q9NQV7 894 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 MBNL1Q9NR56 388 aaKnown RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 SAGE1Q9NXZ1 904 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 MYEF2Q9P2K5 600 aaKnown RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 TRDV1A0A1B0GX56 115 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 TRAPPC13A5PLN9 417 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 LRIT2A6NDA9 550 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 SLC22A31A6NKX4 558 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 NRG2O14511 850 aaPredicted RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 KLK3P07288 261 aaPredicted RBP11.22□□□□□ -0.61
NCDN-202ENST00000373243 MNDAP41218 407 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 CLINT1Q14677 625 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 GPNMBQ14956 572 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 C4orf46Q504U0 113 aa11.22□□□□□ -0.61
NCDN-202ENST00000373243 RNF165Q6ZSG1 346 aa11.22□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 32.6 ms