RNA–Protein interactions for RNA: ENST00000372246.7

ATG4A-204, Transcript of autophagy related 4A cysteine peptidase, humanhuman

TSL 1 (best)

Gene ATG4A, Length 2,501 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4A-204ENST00000372246 BTBD1Q9H0C5 482 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SLC38A1Q9H2H9 487 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 OR52D1Q9H346 318 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 UCK1Q9HA47 277 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SLC6A20Q9NP91 592 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 STARD7Q9NQZ5 370 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 EMC3Q9P0I2 261 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 COPZ2Q9P299 210 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 MBD2Q9UBB5 411 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 LAMP5Q9UJQ1 280 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 ING1Q9UK53 422 aaPredicted RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 FBXO4Q9UKT5 387 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 CHD9Q3L8U1 2897 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM272A0A1B0GTI8 110 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SERTM1A2A2V5 107 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 A8MXK9 166 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 LINC00587B1AMM8 73 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 KPNA3O00505 521 aaPredicted RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 MAN2B1O00754 1011 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 CASC3O15234 703 aaKnown RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 PIN1P1O15428 100 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 UGDHO60701 494 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 AKR7A3O95154 331 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 IGHA1P01876 353 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 C6P13671 934 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 HTR1FP30939 366 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 AKR1C3P42330 323 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 RGS8P57771 180 aaPredicted RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 TSPAN31Q12999 210 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 TGIF1Q15583 401 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 MAPK14Q16539 360 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 C9orf64Q5T6V5 341 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 HENMT1Q5T8I9 393 aaKnown RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 RNLSQ5VYX0 342 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 PYHIN1Q6K0P9 492 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 KIAA1211LQ6NV74 962 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 NIPAL3Q6P499 406 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 FAM111BQ6SJ93 734 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 ETV3LQ6ZN32 361 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF620Q6ZNG0 422 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SLC16A13Q7RTY0 426 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 DEFB128Q7Z7B8 93 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 LRRC56Q8IYG6 542 aaPredicted RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 OR56B4Q8NH76 319 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SUN3Q8TAQ9 357 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 OR5P2Q8WZ92 322 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 CDS1Q92903 461 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 GLYATL1Q969I3 302 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 SEC22AQ96IW7 307 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 FOXN4Q96NZ1 517 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 BBS4Q96RK4 519 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 PTDSS2Q9BVG9 487 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 IFT27Q9BW83 186 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 PBX4Q9BYU1 374 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 ULBP3Q9BZM4 244 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 XRN2Q9H0D6 950 aaKnown RBP eCLIP5□□□□□ -1.61
ATG4A-204ENST00000372246 ZMAT3Q9HA38 289 aaKnown RBP5□□□□□ -1.61
ATG4A-204ENST00000372246 TRPV4Q9HBA0 871 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 PCDHB16Q9NRJ7 776 aa5□□□□□ -1.61
ATG4A-204ENST00000372246 A0A1W2PR48 441 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 J3QRE1 110 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SOX1O00570 391 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PEX12O00623 359 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR2T1O43869 369 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SELENOFO60613 162 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ADAM11O75078 769 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SOCS5O75159 536 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 NDUFS6O75380 124 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 POP7O75817 140 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GPANK1O95872 356 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CSN2P05814 226 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 FGF2P09038 288 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PSMB1P20618 241 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 NFYBP25208 207 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CERS1P27544 350 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 HTR2AP28223 471 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SSR2P43308 183 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 EFNB2P52799 333 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF805Q5CZA5 627 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 MFSD12Q6NUT3 480 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 RBMS3Q6XE24 437 aaKnown RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LIN28BQ6ZN17 250 aaKnown RBP eCLIP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 RASGRP3Q8IV61 690 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ZNF614Q8N883 585 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR2T33Q8NG76 320 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR9A1PQ8NGU1 263 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR10AC1Q8NH08 325 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR4K13Q8NH42 304 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 GNPDA2Q8TDQ7 276 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 ACOT12Q8WYK0 555 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 CPNE2Q96FN4 548 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 SLC41A3Q96GZ6 507 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 PTCHD1Q96NR3 888 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 TSSK2Q96PF2 358 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 OR7D2Q96RA2 312 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 UBL7Q96S82 380 aaPredicted RBP4.99□□□□□ -1.61
ATG4A-204ENST00000372246 TEAD3Q99594 435 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 LGR4Q9BXB1 951 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 NOX4Q9NPH5 578 aa4.99□□□□□ -1.61
ATG4A-204ENST00000372246 TMEM138Q9NPI0 162 aa4.99□□□□□ -1.61
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms