RNA–Protein interactions for RNA: ENST00000371820.3

COL5A1-202, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 628 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-202ENST00000371820 NTSP30990 170 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 RPS5P46782 204 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 CCT3P49368 545 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 KHKP50053 298 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GPR143P51810 404 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 XKP51811 444 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 CRISP3P54108 245 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 IGLV3-21P80748 117 aaPredicted RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 PMP22Q01453 160 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 LAPTM4AQ15012 233 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF385BQ569K4 471 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 COX20Q5RI15 118 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 TMEM236Q5W0B7 351 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 KLHL17Q6TDP4 642 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 RRM2BQ7LG56 351 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 TSEN54Q7Z6J9 526 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 CCDC190Q86UF4 302 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 PARP16Q8N5Y8 322 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 NANOGP1Q8N7R0 232 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GDPD1Q8N9F7 314 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GNPDA2Q8TDQ7 276 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 ASB15Q8WXK1 588 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 HPS1Q92902 700 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 RFKQ969G6 155 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 MAL2Q969L2 176 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 TM4SF18Q96CE8 201 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GPR137Q96N19 417 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 FRMD6Q96NE9 622 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 NIPSNAP1Q9BPW8 284 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 MED18Q9BUE0 208 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 FNDC11Q9BVV2 318 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 PINK1Q9BXM7 581 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 POLR2J2Q9GZM3 115 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 OR8D2Q9GZM6 311 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 DDX31Q9H8H2 851 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 GIMAP4Q9NUV9 329 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 HPF1Q9NWY4 346 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 KLHL28Q9NXS3 571 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 MYOTQ9UBF9 498 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 SLC13A4Q9UKG4 626 aa9.5□□□□□ -0.89
COL5A1-202ENST00000371820 EXOSC1Q9Y3B2 195 aaKnown RBP9.5□□□□□ -0.89
COL5A1-202ENST00000371820 CSMD1Q96PZ7 3565 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 A0A0A6YYD5 115 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 TRGV8A0A0C4DH27 118 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 LOC100506127A0A0U1RQW1 187 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 IQCMA0A1B0GVH7 501 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MYL12BO14950 172 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 FGF17O60258 216 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 KIAA0513O60268 411 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 OR10H2O60403 315 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 RAB36O95755 333 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MYL12AP19105 171 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 GALP22466 123 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MST1P26927 711 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 EPHA2P29317 976 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 BSGP35613 385 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 OR1E2P47887 323 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 CRYBA2P53672 197 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SCN1BQ07699 218 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 RAB40BQ12829 278 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SEC23BQ15437 767 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 TSTQ16762 297 aaKnown RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MRM1Q6IN84 353 aaKnown RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF770Q6IQ21 691 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 XKRXQ6PP77 449 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 OPN5Q6U736 354 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 TMPRSS11AQ6ZMR5 421 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 PNPLA5Q7Z6Z6 429 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 FJX1Q86VR8 437 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 CCDC103Q8IW40 242 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 GHDCQ8N2G8 530 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 RNF175Q8N4F7 328 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 OR56A1Q8NGH5 318 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 OR52J3Q8NH60 311 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 NUBPLQ8TB37 319 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SLC22A8Q8TCC7 542 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SLC2A12Q8TD20 617 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 PTPMT1Q8WUK0 201 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SLC38A5Q8WUX1 472 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 PMM1Q92871 262 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 UBE2FQ969M7 185 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 RELTQ969Z4 430 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MARVELD3Q96A59 401 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 ANKRD9Q96BM1 317 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SLC35G5Q96KT7 338 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SLC38A2Q96QD8 506 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 CHCHD6Q9BRQ6 235 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 TAPBPLQ9BX59 468 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SORBS1Q9BX66 1292 aaKnown RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 ASPNQ9BXN1 380 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 HES7Q9BYE0 225 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 FGF20Q9NP95 211 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 MED17Q9NVC6 651 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 ZNF223Q9UK11 482 aaPredicted RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 ADAM30Q9UKF2 790 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 DIMT1Q9UNQ2 313 aaKnown RBP9.49□□□□□ -0.89
COL5A1-202ENST00000371820 SNX8Q9Y5X2 465 aa9.49□□□□□ -0.89
COL5A1-202ENST00000371820 HTR3EA5X5Y0 456 aa9.48□□□□□ -0.89
COL5A1-202ENST00000371820 NPIPA5E9PKD4 350 aa9.48□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms