RNA–Protein interactions for RNA: ENST00000371447.3

PDE6C-201, Transcript of phosphodiesterase 6C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDE6C, Length 3,307 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6C-201ENST00000371447 SYT13Q7L8C5 426 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 PIGKQ92643 395 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 NDC1Q9BTX1 674 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 SIAEQ9HAT2 523 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 MCCC2Q9HCC0 563 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 RNF215Q9Y6U7 377 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 AHCTF1Q8WYP5 2266 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 TMEM221A6NGB7 291 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 RNF13O43567 381 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 DOK2O60496 412 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 PRAMEF2O60811 474 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 WISP1O95388 367 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 KRT8P05787 483 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 CSF3P09919 207 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 ARFIP1P53367 373 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 LIMK1P53667 647 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 CD83Q01151 205 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 C1QL3Q5VWW1 255 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 TMEM91Q6ZNR0 172 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 NR2C2APQ86WQ0 139 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 GPR135Q8IZ08 494 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 KDM8Q8N371 416 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 OR8K3Q8NH51 312 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 ENKURQ8TC29 256 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 GHSRQ92847 366 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF524Q96C55 264 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 TCTN2Q96GX1 697 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 SRRQ9GZT4 340 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 ST6GALNAC1Q9NSC7 600 aaPredicted RBP10.79□□□□□ -0.68
PDE6C-201ENST00000371447 NLKQ9UBE8 527 aa10.79□□□□□ -0.68
PDE6C-201ENST00000371447 FAM186AA6NE01 2351 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TEX13CA0A0J9YWL9 993 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SERINC4A6NH21 518 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CHP2O43745 196 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 B3GALNT1O75752 331 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 IL1AP01583 271 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SRFP11831 508 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 FOLR1P15328 257 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CCR5P51681 352 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SCN1BQ07699 218 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 KCNJ8Q15842 424 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF517Q6ZMY9 492 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 LNX2Q8N448 690 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SGTBQ96EQ0 304 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 MOGAT1Q96PD6 335 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ORAI3Q9BRQ5 295 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 RTN4RQ9BZR6 473 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SLC25A18Q9H1K4 315 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 UBE2ZQ9H832 354 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CUTCQ9NTM9 273 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 NTMQ9P121 344 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 EXTL2Q9UBQ6 330 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 PLCL2Q9UPR0 1127 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 RASD1Q9Y272 281 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SLC35A3Q9Y2D2 325 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TP53BP1Q12888 1972 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ISPDA4D126 451 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CPNE3O75131 537 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SBK2P0C263 348 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 RPS5P46782 204 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SOX2P48431 317 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ATP12AP54707 1039 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TOMM34Q15785 309 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 PRTGQ2VWP7 1150 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CCDC157Q569K6 752 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ZNF362Q5T0B9 420 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 GARNL3Q5VVW2 1013 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 GDPGP1Q6ZNW5 385 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 LANCL3Q6ZV70 420 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 Q7L0L9 218 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 MARCH3Q86UD3 253 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 NUDT22Q9BRQ3 303 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TTYH2Q9BSA4 534 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 PHF7Q9BWX1 381 aaPredicted RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ANKRD19PQ9H560 264 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TRIM36Q9NQ86 728 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CMC2Q9NRP2 79 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 NUFIP1Q9UHK0 495 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 AK6Q9Y3D8 172 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 A0A0G2JMP0 313 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 A0A0X1KG70 313 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 A0A1B0GTH9 108 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 HLA-DQA2P01906 255 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 MT-ND5P03915 603 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CD27P26842 260 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SLC6A6P31641 620 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 RFX2P48378 723 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 CLDN12P56749 244 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 MRPS15P82914 257 aaKnown RBP10.78□□□□□ -0.68
PDE6C-201ENST00000371447 DMWDQ09019 674 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 SLC25A35Q3KQZ1 300 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ARHGAP40Q5TG30 622 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 HLA-DQA1Q5Y7H0 255 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 LEG1Q6P5S2 330 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 ULK3Q6PHR2 472 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 GID4Q8IVV7 300 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 OR4M2Q8NGB6 313 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 GAL3ST1Q99999 423 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 TRIM2Q9C040 744 aa10.78□□□□□ -0.68
PDE6C-201ENST00000371447 BEX1Q9HBH7 125 aa10.78□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms