RNA–Protein interactions for RNA: ENST00000371142.8

TM9SF3-201, Transcript of transmembrane 9 superfamily member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TM9SF3, Length 6,141 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TM9SF3-201ENST00000371142 A8MXE2 369 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 DOK2O60496 412 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 SCRG1O75711 98 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 MZT1Q08AG7 82 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 PARP16Q8N5Y8 322 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 OR6F1Q8NGZ6 308 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 DYNLRB1Q9NP97 96 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 METTL15A6NJ78 407 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 MRPL33O75394 65 aaKnown RBP20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 HTR5AP47898 357 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 MLLT11Q13015 90 aaPredicted RBP20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 PRAMEF20Q5VT98 475 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 APOOLQ6UXV4 268 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 A0A1W2PQ09 198 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 OR7A17O14581 309 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 TMEM176BQ3YBM2 270 aaPredicted RBP20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 C19orf47Q8N9M1 422 aaKnown RBP20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 TCTN2Q96GX1 697 aa20.65■□□□□ 0.9
TM9SF3-201ENST00000371142 CCDC88AQ3V6T2 1871 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 MEIOCA2RUB1 952 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 GAPDHSO14556 408 aaPredicted RBP20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 HSPB6O14558 160 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 NKX6-1P78426 367 aaPredicted RBP20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 TNFRSF17Q02223 184 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 TNK1Q13470 666 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 SLC9A3R2Q15599 337 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 DNAJC5GQ8N7S2 189 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 HSD17B8Q92506 261 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 KCNJ16Q9NPI9 418 aa20.64■□□□□ 0.9
TM9SF3-201ENST00000371142 TSPAN11A1L157 253 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SEC14L2O76054 403 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 CLDN17P56750 224 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SLC35D2Q76EJ3 337 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 C12orf45Q8N5I9 185 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ADAMTS14Q8WXS8 1223 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ARNT2Q9HBZ2 717 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF705FA8MVS1 300 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF264O43296 627 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF705DP0CH99 300 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF705BP0CI00 300 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 OR8G3PP0DMU2 310 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 TNFSF8P32971 234 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 NUDT1P36639 197 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 RAB38P57729 211 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 PCBD1P61457 104 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF534Q76KX8 674 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 TAAR8Q969N4 342 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SYT11Q9BT88 431 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 MYH1P12882 1939 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 GMDSO60547 372 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 NOVP48745 357 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 TAS2R19P59542 299 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SSX2Q16385 188 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SLC16A14Q7RTX9 510 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 MIB2Q96AX9 1013 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 LIN37Q96GY3 246 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 BIN3Q9NQY0 253 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF593O00488 134 aaPredicted RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 SOCS6O14544 535 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 HLA-AP01891 365 aaKnown RBP20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 LTB4RQ15722 352 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 OR2A12Q8NGT7 310 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 RCE1Q9Y256 329 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF281Q9Y2X9 895 aa20.64■□□□□ 0.89
TM9SF3-201ENST00000371142 PRAMEF27A3QJZ7 478 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 IL32P24001 234 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 BATFQ16520 125 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PRAMEF9Q5VWM5 478 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 NKAIN2Q5VXU1 208 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 OPN5Q6U736 354 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 LRRC28Q86X40 367 aaPredicted RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PGBD5Q8N414 524 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 ZFAND1Q8TCF1 268 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 ASB17Q8WXJ9 295 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PSMF1Q92530 271 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 HAS2Q92819 552 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 FKRPQ9H9S5 495 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 BOKQ9UMX3 212 aaPredicted RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PRKRAO75569 313 aaKnown RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 ARAFP10398 606 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 GPR19Q15760 415 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 SFRP5Q5T4F7 317 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 OR52W1Q6IF63 320 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 OR4M1Q8NGD0 313 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 ACSS1Q9NUB1 689 aaPredicted RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 BCAT2O15382 392 aaPredicted RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 TBPL2Q6SJ96 375 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 B3GNT9Q6UX72 402 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 KIAA0907Q7Z7F0 614 aaPredicted RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PM20D2Q8IYS1 436 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 NDUFAF4Q9P032 175 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 CCL26Q9Y258 94 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 SLC43A1O75387 559 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 GNB3P16520 340 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 ZNF91Q05481 1191 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PDE7AQ13946 482 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 B3GLCTQ6Y288 498 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 OR2T11Q8NH01 316 aa20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 PDLIM5Q96HC4 596 aaKnown RBP20.63■□□□□ 0.89
TM9SF3-201ENST00000371142 CMSS1Q9BQ75 279 aaKnown RBP20.63■□□□□ 0.89
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms