RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 DNASE2O00115 360 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 LGALS8O00214 317 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 OR1F1O43749 312 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 CSNK2A2P19784 350 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ILF3Q12906 894 aaKnown RBP eCLIP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF77Q15935 545 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 EIPR1Q53HC9 387 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 TCEAL5Q5H9L2 206 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 MRM1Q6IN84 353 aaKnown RBP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF793Q6ZN11 406 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ZNF454Q8N9F8 522 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 NUP43Q8NFH3 380 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ORAI1Q96D31 301 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 CDCA3Q99618 268 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ORAI3Q9BRQ5 295 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 ACTRT3Q9BYD9 372 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 SLC25A32Q9H2D1 315 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 MTHFD2LQ9H903 347 aaPredicted RBP16.09■□□□□ 0.17
CHTOP-203ENST00000368690 OPN4Q9UHM6 478 aa16.09■□□□□ 0.17
CHTOP-203ENST00000368690 TRAPPC13A5PLN9 417 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 LRIT2A6NDA9 550 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 DUXAA6NLW8 204 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 ZNF879B4DU55 563 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 H7BY64 318 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 VEGFDO43915 354 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 KHDRBS3O75525 346 aaKnown RBP16.08■□□□□ 0.16
CHTOP-203ENST00000368690 AGR2O95994 175 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 HPP00738 406 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 VIPR2P41587 438 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 GDI2P50395 445 aaKnown RBP16.08■□□□□ 0.16
CHTOP-203ENST00000368690 MAZP56270 477 aaKnown RBP16.08■□□□□ 0.16
CHTOP-203ENST00000368690 ACTA2P62736 377 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 ACTG2P63267 376 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 CEBPEQ15744 281 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 CLVS2Q5SYC1 327 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 C9orf64Q5T6V5 341 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 IZUMO1Q8IYV9 350 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 OR13C5Q8NGS8 318 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 NSMAFQ92636 917 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 MRPS24Q96EL2 167 aaKnown RBP16.08■□□□□ 0.16
CHTOP-203ENST00000368690 PRAP1Q96NZ9 151 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 NPAS1Q99742 590 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 DPH1Q9BZG8 443 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 CACYBPQ9HB71 228 aaKnown RBP16.08■□□□□ 0.16
CHTOP-203ENST00000368690 COPS3Q9UNS2 423 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 C2orf16Q68DN1 1984 aa16.08■□□□□ 0.16
CHTOP-203ENST00000368690 RIIAD1A6NNX1 92 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 ERAL1O75616 437 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 ZIC2O95409 532 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 ADRB1P08588 477 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 RAB40ALP0C0E4 278 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 DPP4P27487 766 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 RPS11P62280 158 aaKnown RBP eCLIP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MPPED2Q15777 294 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 PUS10Q3MIT2 529 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MTFR2Q6P444 385 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 CHRDL2Q6WN34 429 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 TMPRSS11FQ6ZWK6 438 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 CCDC116Q8IYX3 515 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 SLC43A2Q8N370 569 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 OR5K2Q8NHB8 316 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 RAB40AQ8WXH6 277 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 TFGQ92734 400 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 SLC25A38Q96DW6 304 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 SIPA1Q96FS4 1042 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MRGPRX3Q96LB0 322 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 SLC38A3Q99624 504 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 DZANK1Q9NVP4 752 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MRPL15Q9P015 296 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 NTMQ9P121 344 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 FBXL2Q9UKC9 423 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 KCNK7Q9Y2U2 307 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 POU2F2P09086 479 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 IL9P15248 144 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MPIP34949 423 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 PTH2RP49190 550 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 GMFBP60983 142 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 SIM1P81133 766 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MAT1AQ00266 395 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 HYAL1Q12794 435 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 LINC00303Q3SY05 128 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 PABPC1L2AQ5JQF8 200 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 LY6G5CQ5SRR4 150 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 RPL22L1Q6P5R6 122 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 FRRS1Q6ZNA5 592 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 DNM1P46Q6ZS02 220 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 C11orf96Q7Z7L8 435 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 RANBP3LQ86VV4 465 aaPredicted RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 DNAAF1Q8NEP3 725 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 OR6K3Q8NGY3 331 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 IRF7Q92985 503 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 MENTQ9BUN1 341 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 ARL6Q9H0F7 186 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 OR51V1Q9H2C8 321 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 CYB5R1Q9UHQ9 305 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 GPR160Q9UJ42 338 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 CES1P1Q9UKY3 287 aa16.07■□□□□ 0.16
CHTOP-203ENST00000368690 AK6Q9Y3D8 172 aaKnown RBP16.07■□□□□ 0.16
CHTOP-203ENST00000368690 GIMAP1-GIMAP5A0A087WTJ2 511 aa16.06■□□□□ 0.16
CHTOP-203ENST00000368690 A0A1W2PPV9 198 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms