RNA–Protein interactions for RNA: ENST00000368531.6

TPM3-211, Transcript of tropomyosin 3, humanhuman

TSL 1 (best) BASIC

Gene TPM3, Length 1,115 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-211ENST00000368531 STSP08842 583 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 GABRA1P14867 456 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 FUT4P22083 530 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 CBLP22681 906 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 IFNA8P32881 189 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 OR2B6P58173 313 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 MYBPHQ13203 477 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 ACSF3Q4G176 576 aaPredicted RBP12.48□□□□□ -0.41
TPM3-211ENST00000368531 FAM98BQ52LJ0 330 aaKnown RBP12.48□□□□□ -0.41
TPM3-211ENST00000368531 RTL6Q6ICC9 239 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 WDR88Q6ZMY6 472 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 P4HA3Q7Z4N8 544 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 YTHDF3Q7Z739 585 aaKnown RBP12.48□□□□□ -0.41
TPM3-211ENST00000368531 CYP4Z1Q86W10 505 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 ZDHHC21Q8IVQ6 265 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 NKAIN4Q8IVV8 208 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 ZPLD1Q8TCW7 415 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 C7orf34Q96L11 122 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 ZNF300Q96RE9 604 aaPredicted RBP12.48□□□□□ -0.41
TPM3-211ENST00000368531 PRRG4Q9BZD6 226 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 COQ10BQ9H8M1 238 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 PRDM4Q9UKN5 801 aa12.48□□□□□ -0.41
TPM3-211ENST00000368531 PHF3Q92576 2039 aaKnown RBP12.48□□□□□ -0.41
TPM3-211ENST00000368531 IGHV3-15A0A0B4J1V0 119 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 DHRS12A0PJE2 317 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 AQP12BA6NM10 295 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 A8MVM7 634 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 ANKRD65E5RJM6 399 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 J3QKU1 62 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 KPNA4O00629 521 aaPredicted RBP12.47□□□□□ -0.41
TPM3-211ENST00000368531 ADAMDEC1O15204 470 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 ZNF208O43345 1280 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 SYNGR4O95473 234 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 IMPDH2P12268 514 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 RPS5P46782 204 aaKnown RBP12.47□□□□□ -0.41
TPM3-211ENST00000368531 DIO1P49895 249 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 PMPCAQ10713 525 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 ST3GAL3Q11203 375 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 PON3Q15166 354 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 C1orf140Q5VVS0 124 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 TTC33Q6PID6 262 aaPredicted RBP12.47□□□□□ -0.41
TPM3-211ENST00000368531 TMPPEQ6ZT21 453 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 AQP12AQ8IXF9 295 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 ADGRG5Q8IZF4 528 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 C10orf53Q8N6V4 93 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 CANT1Q8WVQ1 401 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 ROBO4Q8WZ75 1007 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 SLC25A36Q96CQ1 311 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 RSRC1Q96IZ7 334 aaKnown RBP12.47□□□□□ -0.41
TPM3-211ENST00000368531 ADGRG7Q96K78 797 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 PRSS27Q9BQR3 290 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 SRXN1Q9BYN0 137 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 C12orf10Q9HB07 376 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 IL1RAPQ9NPH3 570 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 TESMINQ9Y4I5 508 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 FAM215AQ9Y5M1 114 aa12.47□□□□□ -0.41
TPM3-211ENST00000368531 MYO7BQ6PIF6 2116 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 IGKV1D-42A0A075B6H8 117 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 AHSA1O95433 338 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 TGM6O95932 706 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 NQO1P15559 274 aaKnown RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 ITGA2P17301 1181 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 RHCEP18577 417 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 KLK2P20151 261 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 FPR1P21462 350 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 FKBP2P26885 142 aaKnown RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 IDUAP35475 653 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 CLK1P49759 484 aaKnown RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 SPIBQ01892 262 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 EGR4Q05215 589 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 TRAM2Q15035 370 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 SF3B4Q15427 424 aaKnown RBP eCLIP12.46□□□□□ -0.411e-13■■□□□ 12.6
TPM3-211ENST00000368531 OR7A5Q15622 319 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 B3GNT6Q6ZMB0 384 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 OR52J3Q8NH60 311 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 FNDC9Q8TBE3 224 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 STK35Q8TDR2 534 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 TMEM255BQ8WV15 326 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 KTI12Q96EK9 354 aaPredicted RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 RAB3IPQ96QF0 476 aaPredicted RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 PIP5K1AQ99755 562 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 POTEKPQ9BYX7 375 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 POLR2J2Q9GZM3 115 aaKnown RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 POLR2J3Q9H1A7 115 aaKnown RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 MAGIXQ9H6Y5 334 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 NMNAT1Q9HAN9 279 aaPredicted RBP12.46□□□□□ -0.41
TPM3-211ENST00000368531 TIGARQ9NQ88 270 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 MEMO1Q9Y316 297 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 HDGFL3Q9Y3E1 203 aa12.46□□□□□ -0.41
TPM3-211ENST00000368531 A0A1B0GUH1 482 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 TCRBV3S1A0A5B6 114 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 SLC22A20A6NK97 555 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 E9PLN8 166 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 AQP8O94778 261 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 PRSS23O95084 383 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 H1F0P07305 194 aaKnown RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 HOXD4P09016 255 aaPredicted RBP12.45□□□□□ -0.42
TPM3-211ENST00000368531 GLI4P10075 376 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 UMPSP11172 480 aa12.45□□□□□ -0.42
TPM3-211ENST00000368531 ENPP1P22413 925 aa12.45□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms