RNA–Protein interactions for RNA: ENST00000366304.3

HMGB1P39-201, Transcript of high mobility group box 1 pseudogene 39, humanhuman

BASIC

Gene HMGB1P39, Length 880 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P39-201ENST00000366304 TCN1P20061 433 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 NPR2P20594 1047 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 EFNA1P20827 205 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 PRTN3P24158 256 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 HSD17B3P37058 310 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SLC1A3P43003 542 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 GPR6P46095 362 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SUMO3P55854 103 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SESN3P58005 492 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZP4Q12836 540 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 TBRG1Q3YBR2 411 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CASP12Q6UXS9 341 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 Q6ZPA2 131 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 C3orf62Q6ZUJ4 267 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 DOK3Q7L591 496 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 OLIG3Q7RTU3 272 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 KLHL7Q8IXQ5 586 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDRT4Q8N9R6 151 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR6Y1Q8NGX8 325 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CKAP2Q8WWK9 683 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDKL2Q92772 493 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CDS1Q92903 461 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 BOD1Q96IK1 185 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 EGLN2Q96KS0 407 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 KCNA7Q96RP8 456 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 KRTAP4-6Q9BYQ5 205 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 OR11A1Q9GZK7 315 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF442Q9H7R0 627 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 ZNF275Q9NSD4 429 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 KCNE5Q9UJ90 142 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 FBXO9Q9UK97 447 aaPredicted RBP7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 GRID1Q9ULK0 1009 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SNX6Q9UNH7 406 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 SNX24Q9Y343 169 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CORINQ9Y5Q5 1042 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 FLVCR1Q9Y5Y0 555 aa7.28□□□□□ -1.24
HMGB1P39-201ENST00000366304 CCDC189A1A4V9 331 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 TTC36A6NLP5 189 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MPZL1O95297 269 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 LGI1O95970 557 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 CRYAAP02489 173 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 HSD3B1P14060 373 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 HPGDP15428 266 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 HSD3B2P26439 372 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MPGP29372 298 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 GCH1P30793 250 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 NTSP30990 170 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 SEC24CP53992 1094 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 IL13RA1P78552 427 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 H3F3AP84243 136 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 DR1Q01658 176 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 ACSM2AQ08AH3 577 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 SYT14P1Q58G82 188 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 ACSM2BQ68CK6 577 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 CDC73Q6P1J9 531 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 C3orf33Q6P1S2 294 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 CNPY4Q8N129 248 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 RIBC1Q8N443 379 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MMGT1Q8N4V1 131 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 COX18Q8N8Q8 333 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 NUP37Q8NFH4 326 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 BHLHE22Q8NFJ8 381 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR1K1Q8NGR3 316 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 OR5W2Q8NH69 310 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 WFDC12Q8WWY7 111 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 JADE3Q92613 823 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 BCL2L2Q92843 193 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MRRFQ96E11 262 aaKnown RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MYCBPQ99417 103 aaPredicted RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 THUMPD3Q9BV44 507 aaKnown RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 BTBD2Q9BX70 525 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MRPL37Q9BZE1 423 aaKnown RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF665Q9H7R5 613 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 NMRK1Q9NWW6 199 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 SIRT5Q9NXA8 310 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 MYEF2Q9P2K5 600 aaKnown RBP7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF69Q9UC07 566 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 JRKLQ9Y4A0 524 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 TIMM22Q9Y584 194 aa7.27□□□□□ -1.25
HMGB1P39-201ENST00000366304 COL7A1Q02388 2944 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 A0A096LPE4 126 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 IGHV2OR16-5A0A0B4J2B6 119 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 A0A1W2PPZ6 126 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 A8MT66 165 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 GOLGA6L6A8MZA4 724 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 NPIPB8E9PQR5 432 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 GPR171O14626 319 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 PPIHO43447 177 aaKnown RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 SKAP2O75563 359 aaPredicted RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 WNT11O96014 354 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 RNASE1P07998 156 aaKnown RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 IFI6P09912 130 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 LCN1P31025 176 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 ALDH3B1P43353 468 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 ZNF763Q0D2J5 394 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 MERTKQ12866 999 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 HNRNPA0Q13151 305 aaKnown RBP7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 SKP2Q13309 424 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 SLC17A1Q14916 467 aa7.26□□□□□ -1.25
HMGB1P39-201ENST00000366304 MAD2L1BPQ15013 274 aaPredicted RBP7.26□□□□□ -1.25
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms