RNA–Protein interactions for RNA: ENST00000362455.1

RNU4-39P-201, Transcript of RNA, U4 small nuclear 39, pseudogene, humanhuman

BASIC

Gene RNU4-39P, Length 127 nt, Biotype snRNA, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU4-39P-201ENST00000362455 NTN3O00634 580 aaPredicted RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 FBP2O00757 339 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CALUO43852 315 aaPredicted RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 TSPAN2O60636 221 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZMPSTE24O75844 475 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 TNFSF15O95150 251 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CSF2P04141 144 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 PAEPP09466 180 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 ADORA3P0DMS8 318 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 KRT13P13646 458 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CMA1P23946 247 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NUDT1P36639 197 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC6A8P48029 635 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NDUFA8P51970 172 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 GABPB1Q06547 395 aaPredicted RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NME3Q13232 169 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 C1orf61Q13536 156 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 DEFB133Q30KQ1 61 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 KCTD16Q68DU8 428 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CLEC18BQ6UXF7 455 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 ASRGL1Q7L266 308 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 EFL1Q7Z2Z2 1120 aaKnown RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 LRRTM1Q86UE6 522 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CARM1Q86X55 608 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 LINC00518Q8N0U6 118 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 ICA1LQ8NDH6 482 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CHDHQ8NE62 594 aaPredicted RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 PCNPQ8WW12 178 aaKnown RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM37Q8WXS4 190 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 HSFY1Q96LI6 401 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF396Q96N95 335 aaPredicted RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 CALN1Q9BXU9 219 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 KRTAP9-8Q9BYQ0 159 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NLNQ9BYT8 704 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NMNAT2Q9BZQ4 307 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 HS3ST2Q9Y278 367 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 KLHDC2Q9Y2U9 406 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 SNX10Q9Y5X0 201 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 SPENQ96T58 3664 aaKnown RBP4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 NBASA2RRP1 2371 aa4.61□□□□□ -1.67
RNU4-39P-201ENST00000362455 TCHHQ07283 1943 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 MYH11P35749 1972 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGHV4-30-2A0A087WSY4 118 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRBV5-4A0A0C4DH59 114 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGLON5A6NGN9 336 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 M0QYV0 167 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ARHGEF9O43307 516 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 IDH3BO43837 385 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 AKR7A3O95154 331 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 CD160O95971 181 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 DESP17661 470 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 HNRNPA2B1P22626 353 aaKnown RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 PTPN4P29074 926 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 PRDX2P32119 198 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 UGT1A5P35504 534 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 DUSP3P51452 185 aaPredicted RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC8A3P57103 927 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 PFN3P60673 137 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 PMP22Q01453 160 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 KRTAP1-1Q07627 177 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 SNX1Q13596 522 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 IGFBP7Q16270 282 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 TMEM110Q86TL2 294 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 VASH2Q86V25 355 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZNF557Q8N988 423 aaPredicted RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 WDSUB1Q8N9V3 476 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 MINDY2Q8NBR6 621 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 FAM71CQ8NEG0 241 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 OR8D1Q8WZ84 308 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 FCGR1BQ92637 280 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 BTN2A3PQ96KV6 586 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 POM121L2Q96KW2 1035 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 C16orf45Q96MC5 204 aaPredicted RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 SERPINB11Q96P15 392 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 RCHY1Q96PM5 261 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 CCNL2Q96S94 520 aaPredicted RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 SLC17A9Q9BYT1 436 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 LIN28AQ9H9Z2 209 aaKnown RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ROPN1Q9HAT0 212 aaPredicted RBP4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ZDHHC18Q9NUE0 388 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ANKMY1Q9P2S6 941 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 MIOXQ9UGB7 285 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 KIAA1257Q9ULG3 409 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 AURKCQ9UQB9 309 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 FADS3Q9Y5Q0 445 aa4.6□□□□□ -1.67
RNU4-39P-201ENST00000362455 ANKRD17O75179 2603 aaKnown RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRIM49BA6NDI0 452 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 F5H5T6 163 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 KPNA3O00505 521 aaPredicted RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ALOX15BO15296 676 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 AQP9O43315 295 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ADCY5O95622 1261 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 CYP11B1P15538 503 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 UGT1A4P22310 534 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 HPDP32754 393 aaPredicted RBP4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 TRIM23P36406 574 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 ETV5P41161 510 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 MAGEA4P43358 317 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 HILS1P60008 231 aa4.59□□□□□ -1.67
RNU4-39P-201ENST00000362455 CCL7P80098 99 aa4.59□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms